Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja4g1369 ATGGCAGACATGAAGCTTTTTCTTCCTCTCCATCGAAGATCGAATATGACAACGACGAACGAGTTTAGGCGCTTTGATGTGGCTTCCGACGACTCAGATCACCACTATGGCGGCAGCGGAAACAACAACATTACGCGCAACACAAAGAAGAGTATTATGAAGGAGTGGAAAACCCTGGAGAAAAATCTACCTGAATCCATCTACGTTCGAGTCTACGAGCAGCGCATTGATCTCATGAGGGCGGTGATTATAGGGGCCGCTGGAACGCCCTACCACGATGGCCTCTTCTTCTTCGACATCGCTTTCCCCTCTGATTACCCGAACCACCCGCCCAAGGTCCACTTCATCTCGTTCGGCCTCCGCCTCAACCCGAACCTATACACCAGTGGCTATGTTTGCTTGAGCCTCCTCAACACGTGGACCGGGAAGAAGAACGAGTTGTGGGACCCATCTGTGTCCACGTGTCTACAGCTCCTTATCTCCCTTCAAGGACTCGTTCTCAACGAGAAGCCCTACTTCAATGAGCCAGGTTCCGACACGCTCGGTCGTTTCCTCGTTAATGGCTCGTCACGTTCCTATAGTGAGTACAACTTTGAGGCCTTCGTCAAGAGCCACTTCCGCGATCGTGCGGTAGTGATTCTCACCGCATTCACGGAGTACGCAAATGGACGTGAGCGTATCGGGTACTATAGCGCCGACACGTCCTCTTCGCGTCCGCGAAAGCATAGGGTTTCGCGGACATACAAGAGGTGGATGCTGGAGGTTTACCCTTTGATGGTTGATGCATTTGAAGGGTGTGGTGCTTCTTTGGATACTTCCCTTCGCAGCTTGGTGTTGCTATCCGAGTCCAAGAGCAAGAAGATTAGTACAATCTGGACGAAAGCGATGGCGCAGATAAAAAATGCTTTTACATGGAAGAAGAAGAATAATAGAAAAGAAATTACTAGGGAGACGTCTGCATGA 963 0.5036 MADMKLFLPLHRRSNMTTTNEFRRFDVASDDSDHHYGGSGNNNITRNTKKSIMKEWKTLEKNLPESIYVRVYEQRIDLMRAVIIGAAGTPYHDGLFFFDIAFPSDYPNHPPKVHFISFGLRLNPNLYTSGYVCLSLLNTWTGKKNELWDPSVSTCLQLLISLQGLVLNEKPYFNEPGSDTLGRFLVNGSSRSYSEYNFEAFVKSHFRDRAVVILTAFTEYANGRERIGYYSADTSSSRPRKHRVSRTYKRWMLEVYPLMVDAFEGCGASLDTSLRSLVLLSESKSKKISTIWTKAMAQIKNAFTWKKKNNRKEITRETSA* 321
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja4g1369 320 PANTHER (E3-INDEPENDENT) E2 UBIQUITIN-CONJUGATING ENZYME 14 284 - -
Lja4g1369 320 CDD UBCc 50 176 IPR000608 -
Lja4g1369 320 SMART ubc_7 50 211 - -
Lja4g1369 320 Gene3D Ubiquitin Conjugating Enzyme 11 261 IPR016135 -
Lja4g1369 320 ProSiteProfiles Ubiquitin-conjugating (UBC) core domain profile. 47 206 IPR000608 -
Lja4g1369 320 PANTHER UBIQUITIN-CONJUGATING ENZYME E2 38-RELATED 14 284 - -
Lja4g1369 320 Pfam Ubiquitin-conjugating enzyme 52 178 IPR000608 -
Lja4g1369 320 SUPERFAMILY UBC-like 30 197 IPR016135 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja4g1369 Lja-Chr4 12251341 12254088 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja4g1369 22 268 Miscellaneous Gene Families AT2G33770 44.815 2.11e-64 216
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja4g1369 K10581 - gmx:100810318 318.161
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja4g1369 4 12251341 12254088 Lja4g1369 4 12251341 12254088 ECH