Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja4g1360 ATGAGCAGCATCATGAACTATTGCCTTCTGTTCTTCCTCTGCTCCATATTGCCCCTTGTACTTAGCCATGTGGGAATACATTCAGGCCCTTCAACTCAGATTCTGCATTCTTTCCATGAAGACAAAAACAAGTCAATCACAGTGAAAGAAGAACAAGAACACTCTACATCTAGAAATTTTTCATTGCACGGTTCTTGCAGTAACAGAGACATAAGCATCTCACAAAGCCAAGAATCTACTACTGGGATTCCACAGTATGCTGTGCAAATTGCCAACACCTGTGTTTCTGAGTGTGCTCCACGTGAAATCCACATCCACTGCGGCTGGTTTGCTTCTGCAAGAGTAATCAACCCCGGATTGTTCAAGAGGCTTTCCTATGATGATTGCTTGGTGAATGGAGGGAATCCTTTAGCCTCTAGCCAGATCATCAGATTCTCCTATTACAATTCCTTCCTGTATCCTCTTGCATTCAAGTCTGCCATATTTTGTTGA 492 0.4289 MSSIMNYCLLFFLCSILPLVLSHVGIHSGPSTQILHSFHEDKNKSITVKEEQEHSTSRNFSLHGSCSNRDISISQSQESTTGIPQYAVQIANTCVSECAPREIHIHCGWFASARVINPGLFKRLSYDDCLVNGGNPLASSQIIRFSYYNSFLYPLAFKSAIFC* 164
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja4g1360 163 PANTHER PROTEIN TAPETUM DETERMINANT 1-LIKE 24 163 - -
Lja4g1360 163 PANTHER PROTEIN TAPETUM DETERMINANT 1-LIKE-RELATED 24 163 IPR040361 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja4g1360 Lja-Chr4 12196062 12196819 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja4g1360 - - aprc:113852241 249.21
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja4g1360 4 12196062 12196819 Lja4g1360 4 12196062 12196819 ECH