Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja4g1343 ATGAACAGCGGTAGCAGCAACTTGGAGACTCGGTCTCTGCTTGATGAGCTAAGTCACTTTAACAAAGGGGGTCTCTTTGATTTTGGACACCCTCTTCTTAACCGCATAGCTGAGAGCTTTGTTAAAGCTGCTGGGATAGGAGCAGTTCAAGCTGTGTCCCGTGAGGCCTACTTCACAGCTGTTGAAGGTGCTGGGATTGATAATGCAGGGGGTATGCCTCCAGAAGTTTCTGCCACCAGGAAAAATCGTTTGCCTGGCCTTAGAGGAGAGACCAGCAACAAATCCCTTGAGGCCATGGTGAAGAATACAGGGAAAGAATCCTTCCAGTGGGGATTGGCTGCAGGATTATATTCAGGACTCACATATGGGCTGAAAGAAGCACGTGGAGCTCATGACTGGAAAAATAGCGCGGTTGCAGGAGCAATTACTGGTGCAACACTTGCACTCACCTCAGATGACTCATCTCATGAACAGATTGTGCAATGTGCTATAACTGGAGCAGCTATCTCCACTGCTGCAAATCTTCTAACTGGGATATTTTAA 543 0.477 MNSGSSNLETRSLLDELSHFNKGGLFDFGHPLLNRIAESFVKAAGIGAVQAVSREAYFTAVEGAGIDNAGGMPPEVSATRKNRLPGLRGETSNKSLEAMVKNTGKESFQWGLAAGLYSGLTYGLKEARGAHDWKNSAVAGAITGATLALTSDDSSHEQIVQCAITGAAISTAANLLTGIF* 181
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja4g1343 180 PANTHER OUTER ENVELOPE PORE PROTEIN 16-2, CHLOROPLASTIC 6 180 - -
Lja4g1343 180 Pfam Tim17/Tim22/Tim23/Pmp24 family 33 170 - -
Lja4g1343 180 PANTHER TIM23 6 180 IPR045238 GO:0022857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja4g1343 Lja-Chr4 12061970 12064226 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja4g1343 - - gmx:100800540 302.367
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja4g1343 4 12061970 12064226 Lja4g1343 4 12061970 12064226 ECH