Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja4g1337 ATGGCGAAGGACATAGACGAGTTGCCGAAGAACGCAGCGAACTACACGGCGTTGACGCCGCTCTGGTTCTTAGAGAGAGCAGCTCAGGTGCATCCCAACAGAAAATCGCTCATCCATGGATCCCGTCACTACACGTGGCACCAGACTTACCAGCGTTGCCGTCGATTCGCCTCCGCTCTTTCCAACCACTCCATTGGCCTCGGAAACACCGTAGCTGTTATTGCACCCAACATTCCAGCACTTTATGAAGCTCATTTTGGGGTTCCAATGGCAGGGGCTGTATTGAACCCTGTTAACATCAGGCTCAATGCATCCACAATAGCTTTCCTTCTTGGTCATTGCACAGCAGCAGTAGTGATCGTAGACCAAGAGTTCTTTTCATTGGCAGAAGAAGCCATGAAAATATGGTCTGAGAAAGCCAAAACCTTCAAGCCTCCAATTCTAATTGTTATTGGTGATGAAAACTGCGACCCTAAGGCACTTCAATATGCTTTGGACAAAGGAGTCATTGAATATGAGGACTTTCTTCAAAGTGGTGACCCTGAATATGCATGGAAACCTCCAGAAGATGAGTGGCAGAGCATTGCTTTGGGTTACACGTCAGGTACCACTGCTAGTCCCAAGGGTGTGGTGTTGCATCACAGGGGAGCTTATTTGATGTCTTTGTGTGGAGCTCTTGTTTGGGGAATGACTGAAGGAGCTGTATATCTTTGGACACTACCCATGTTTCATTGCAATGGGTGGTGCTACACTTGGACACTTCCAGCCATCTATGGCACTAACATTTGCCTTCGCCAGGTAACAGCGAAGGCGGTGTATGAAGCCATTGCAAAATACAAAGTGACTCATTTTTGTGCAGCACCTGTGGTTCTTAACTCAATAATTAATGCCCCACCTGAGGATACCATTCTTCCTCTACCCCATGTGGTACATGTGATTACAGCTGGGGCTGCTCCTCCTCCTTCTGTTCTTTCTGGCATGTCGCAACGAGGATTTCGCGTCACGCACACTTACGGTCTCTCAGAAACTTATGGCCCTTCAGTCTATTGCGCCTGGAAACCCGAGTGGGACTCGCTTCCCCTTGAAACTCAAGCCCGGCTCCACGCAAGGCAAGGGGTTCGGTACATTGTCTTGGAAGGCCTTGACGTTGTGAACACAAAAACCATTAAACCTGTTCCTGCTGATGGTAAAACTGTTGGTGAGATTGTGATGCGGGGTAATGCTGTGATGAAAGGATACCTAAAGAACCCGGAAGCTAATGAAGAGACCTTTGCAAATGGATGGTTTCACTCCGGGGATCTTGCTGTGAAGCATCCAGATGGATATATAGAAATCAAAGACAGATCAAAGGACATCATAATCTCAGGTGCCGAAAACATCAGCAGTGTGGAGATAGAGAATACTCTGTACTCACATCCTGTGATACTGGAGACATCAGTGGTTGCAAGGCCAGATGAGAGATGGGGTGAGTCTCCCTGTGCTTTTGTGACATTAAAACCAGGAGTGGATGCTAGTAATGAGCAGCGTCTAGTTGAGGATATACTCAAGTTTTGCAGGGCCAAGATGCCAGCTTATTGGGTCCCAAAATCAGTAGTATTTGGACTGTTACCTAAGACCGCTACAGGGAAGGTGCAGAAGCATTTGCTGAGGGCCAAGGCAAAAGAGATGGGACCTGTTAGGACGAGCAAGTTGTGA 1695 0.4779 MAKDIDELPKNAANYTALTPLWFLERAAQVHPNRKSLIHGSRHYTWHQTYQRCRRFASALSNHSIGLGNTVAVIAPNIPALYEAHFGVPMAGAVLNPVNIRLNASTIAFLLGHCTAAVVIVDQEFFSLAEEAMKIWSEKAKTFKPPILIVIGDENCDPKALQYALDKGVIEYEDFLQSGDPEYAWKPPEDEWQSIALGYTSGTTASPKGVVLHHRGAYLMSLCGALVWGMTEGAVYLWTLPMFHCNGWCYTWTLPAIYGTNICLRQVTAKAVYEAIAKYKVTHFCAAPVVLNSIINAPPEDTILPLPHVVHVITAGAAPPPSVLSGMSQRGFRVTHTYGLSETYGPSVYCAWKPEWDSLPLETQARLHARQGVRYIVLEGLDVVNTKTIKPVPADGKTVGEIVMRGNAVMKGYLKNPEANEETFANGWFHSGDLAVKHPDGYIEIKDRSKDIIISGAENISSVEIENTLYSHPVILETSVVARPDERWGESPCAFVTLKPGVDASNEQRLVEDILKFCRAKMPAYWVPKSVVFGLLPKTATGKVQKHLLRAKAKEMGPVRTSKL* 565
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja4g1337 564 SUPERFAMILY Acetyl-CoA synthetase-like 12 555 - -
Lja4g1337 564 Pfam AMP-binding enzyme C-terminal domain 464 543 IPR025110 -
Lja4g1337 564 Pfam AMP-binding enzyme 24 455 IPR000873 -
Lja4g1337 564 Gene3D - 3 450 IPR042099 -
Lja4g1337 564 Gene3D - 451 558 IPR045851 -
Lja4g1337 564 CDD ttLC_FACS_AEE21_like 15 551 - -
Lja4g1337 564 PANTHER ACYL-ACTIVATING ENZYME 1 564 - -
Lja4g1337 564 PANTHER DEPENDENT LIGASE, PUTATIVE-RELATED 1 564 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja4g1337 Lja-Chr4 12011289 12017421 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja4g1337 3 564 Miscellaneous Gene Families AT3G16910 75.311 0.0 910
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja4g1337 K01913 - gmx:100808187 1063.52
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja4g1337 4 12011289 12017421 Lja4g1337 4 12011289 12017421 ECH