Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja4g1067 ATGAAATACGTGGAAGACAAGGAGATCTCAAATAGCAGTGCCGTCATGCATCATTCAGAGTTTCAGAATGGAAAAAATGCTGCTCGAGTTTCGAATCATCGTCATCGAATAACTAATGGAAAACCAACCCCATCTAAGTGGGACGATGCACAAAAATGGCTTGTGGGGTTGTCAAAAGGAGGAGGGGGAGGAGAGAAAAGCCAGTCCAAAAGCAGCAAGCCAAGAAACTCAAATGCTGATGATTTGAGATTGATAGCTCCTGTACCACAGAAGGAGCAAGATTACTCAAGCAGTGAGAAGGAAGAAGAGGATCAAGAACATGATGTGTGCCATGATTTCATAACAACTACTACTAGTGATGATGCAGAAACCAATAAATATGTTTCAGAACACACTTTGGTCCCAGTTCAATCACTTTGTTTCAGAGATATGGGGACTGAGATGACACCAATTGCAAGCCAAGAGCCTTCAAGAACTGCTACCCCCATTAGAGCAACAACTCCTGCAACTAGAAGCCCAATTCATTCAGGGACTTCAACTCCAATGAAGGGTCAAAATGGGTTGGATAATAAAGGTGCTGCTGAGGGTGGAAGTGTTTCAAGCAGAGGCAACAATGGCACAATTACTAGGCAGTGTTGTGGTGGAGAAGGGTCTGAGAAGAAGATTGAAGATCAAGCTAAAAAGTTAAGTCCTCTTGAAAGCAGAGCAATTGCTTGGGATGAGGCAGAACGTGCCAAATTTATGGCCAGGTTCAAGCGTGAAGAGGTGAAGATTCAAGCCTGGGAAAATCATCAGATAAGAAAAGCTGAGATGGAAATGAAGAAAATGGAGGTGAAAGCTGAGAGGATGAAAGCTTTGGCACAAGAAAGGTTCACAAATAAACTGGCTACAACTAAGAGAATAGCTGAAGAGAAGAGAGCTAATGCACAAGTGGAGCTGAAGGACCAAGCTTTGAAGACTACTGAAAGGGTAGAGTATATAAGAAGGACAGGGCATGTGCCTTCTTCATTCTCTTTCAACTTCAAGTTGCCTTCCATCTGCTGGTAG 1047 0.4317 MKYVEDKEISNSSAVMHHSEFQNGKNAARVSNHRHRITNGKPTPSKWDDAQKWLVGLSKGGGGGEKSQSKSSKPRNSNADDLRLIAPVPQKEQDYSSSEKEEEDQEHDVCHDFITTTTSDDAETNKYVSEHTLVPVQSLCFRDMGTEMTPIASQEPSRTATPIRATTPATRSPIHSGTSTPMKGQNGLDNKGAAEGGSVSSRGNNGTITRQCCGGEGSEKKIEDQAKKLSPLESRAIAWDEAERAKFMARFKREEVKIQAWENHQIRKAEMEMKKMEVKAERMKALAQERFTNKLATTKRIAEEKRANAQVELKDQALKTTERVEYIRRTGHVPSSFSFNFKLPSICW* 349
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja4g1067 348 MobiDBLite consensus disorder prediction 197 212 - -
Lja4g1067 348 Coils Coil 266 286 - -
Lja4g1067 348 Pfam Remorin, C-terminal region 233 335 IPR005516 -
Lja4g1067 348 Coils Coil 299 319 - -
Lja4g1067 348 MobiDBLite consensus disorder prediction 152 215 - -
Lja4g1067 348 PANTHER F12A21.28 1 341 - -
Lja4g1067 348 MobiDBLite consensus disorder prediction 94 108 - -
Lja4g1067 348 MobiDBLite consensus disorder prediction 1 108 - -
Lja4g1067 348 MobiDBLite consensus disorder prediction 14 28 - -
Lja4g1067 348 PANTHER OS02G0116800 PROTEIN 1 341 - -
Lja4g1067 348 MobiDBLite consensus disorder prediction 152 186 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja4g1067 Lja-Chr4 9250625 9253933 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja4g1067 - - lja:Lj4g3v2526060.1 677.937
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja4g1067 4 9250625 9253933 Lja4g1067 4 9250625 9253933 ECH