Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja4g1065 ATGACAAATCTGGAAATAAAAACAGAGGAACCTGGTCAATCAAACAGTCAAACCCCTCTTCTCACACCAAATTCCAATCACGATAATCACACCAACAATCACGAAGAATGTGATTGCTCTGAAGTGGATCACAGCCTGGTGCGATTGGAGAAATTTCTCAATGCTCTGGGCTTCGACCAGGGCTCCGTGTTGGCTTCCGTGATCTGGTGGACCGTTTTCCTGGCGGTTGGTGTGGCGGTTCCGCTGGTGGCTCTGTGGTTATGTGACTGCTCCGAGTGCGAGATGTACGAGCTCCGCGGCTGTGAGATGGTGATTGTGACGTTTCAGGCCACGCTCGCCGCCGCCTCCTTGCTCTGCCTTTCACATAACCTCCGCAAGTATGGTATCCGCAGGTTCCTATTCGTTGACCGCTACACTGGACACGACTCTTCCTTTCACCGTGATTACGTCAAACAGATTTCGGGATCACTGCGGTTGCTCATTCTGTGGATGTTTCCGTGTTTCATTCTGAAGACGGCACGAGAAATCATTCGCATTTCATATGTACAGCATGGGTCATGGTGGCTCTCACTTGGTATATTTTCAGCTCTGATTATATCTTGGACTTATGTGAGTGCAATCTCTCTGTCCGCCTGCGTTTTGTTTCACATGGTCTGCAATTTGCAAGTCATCCACTTTGTTGATTATGGAAAGCTATTGGAAAGGGAAGGTGATGTGTTGGTTTTATTGGAGGAGCACATTCGGTTGCGTTATCATCTTTCCAAGATAAGTCATAGGTTCAGGATCTATCTTCTTCTGTCGTTCTTGGTTGTCACTGTCAGCCAAGTGGTGACTTTGTTACAGGTCACCGGATATCGTAACATGATTACCATAGTAAATGGTGGAGATTTCGCTGTATCCACACTTGTTCAGGTGGTTGGTATCGTTATTTGTCTGCACGCAGCAACAAGAATTTCTCATAGAGCTCAAGGTGTTGTTTCACTTGCAAGCAGGTGGCATGCAATGGTCACATGCACATCTTCTGACTCGTCTCATTCAAGAAGCTCTGCTAGTATGGGGAATCTCTTGGAGGCTTCAAACAATTTAAACTCAATACATATAGACTATTCTGAAAGTGATTTAGAGTCATTGGATTACCCCGGAATGTCTATTAGTAATACCCAATTGGTTTCCCAGATGTCCTCTAATCACAAGAGACAATCTTTTGTAATGTATTTGCAGACAAATCCTGGAGGAATCACCATATTTGGATGGACAGTTGATCGGTCTCTTGTCAACACAATATTCTTCCTTGAATTAAGTCTGGTTACCTTTGTTCTAGGTCAGACGCTCATCTCATGA 1341 0.4504 MTNLEIKTEEPGQSNSQTPLLTPNSNHDNHTNNHEECDCSEVDHSLVRLEKFLNALGFDQGSVLASVIWWTVFLAVGVAVPLVALWLCDCSECEMYELRGCEMVIVTFQATLAAASLLCLSHNLRKYGIRRFLFVDRYTGHDSSFHRDYVKQISGSLRLLILWMFPCFILKTAREIIRISYVQHGSWWLSLGIFSALIISWTYVSAISLSACVLFHMVCNLQVIHFVDYGKLLEREGDVLVLLEEHIRLRYHLSKISHRFRIYLLLSFLVVTVSQVVTLLQVTGYRNMITIVNGGDFAVSTLVQVVGIVICLHAATRISHRAQGVVSLASRWHAMVTCTSSDSSHSRSSASMGNLLEASNNLNSIHIDYSESDLESLDYPGMSISNTQLVSQMSSNHKRQSFVMYLQTNPGGITIFGWTVDRSLVNTIFFLELSLVTFVLGQTLIS* 447
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja4g1065 446 PANTHER ZINC FINGER CONSTANS-LIKE PROTEIN (DUF3537) 13 445 - -
Lja4g1065 446 MobiDBLite consensus disorder prediction 1 27 - -
Lja4g1065 446 PANTHER RAS GUANINE NUCLEOTIDE EXCHANGE FACTOR K 13 445 IPR021924 -
Lja4g1065 446 Pfam Protein of unknown function (DUF3537) 45 431 IPR021924 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja4g1065 Lja-Chr4 9233054 9236469 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja4g1065 - - lja:Lj4g3v2528100.1 842.417
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja4g1065 4 9233054 9236469 Lja4g1065 4 9233054 9236469 ECH