Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja4g1059 ATGACCGGAAGCGGAAGAACAACCGCTCGGAGCAGACTCCGATCCTCCTCCTCCTCCGACGCCGCCGATCCTCTCCGCGAACGGAGGCCCCGCCTTAACCGCCACGCCAGGAGCAAATACGGCAGCTCCATCCCGTTATTCAACAATACCAATCTCAAAGTGGTTCTCGCTTTCAGCTTCCTCGCATTCTTCCTCATCTGGTTTCTGATCCACCACCTCGTGAACTCCGTCGCCCAGCCTGGTCTTCCTCGCGAAGTCACGCCGTTTCCCGCGCCTAAGATCATGGACCTTCCTCAGTTTCAAGGTCAGCACAAGGAGAGTTTGTATTGGGGAACTTATCGTCCTCATGTCTATCTCGGAATTCGTGCCAGGACTCCACAATCATTGATTGCTGGATTGATGTGGATTGGCGTGAAGGACGGAAGATATCACTTACGGCATGTTTGCAAACAAGAAGATGAGCTGAGTACTTATGGTTGGATAAAGCATGATGGACGTGATTTTGGGCATCAGGTACTGGCTGACCACGGCATGACCTTGACTACTGAGTTTTTAAAGTCAAAGGGGGACGGAAGTGGTTATGGAGGGGACTGGGCAGTTCGAATTGGTGTGCAAGTTGATAAGTCTAAGTGGAATGAGGAATTTGGGAGAGGCGCCCAGCTCTTTTTCTATTTGGCTGATGAAGGTGGTAATGCTCTGGATGTAAGTAGAGAAAACTTGAACATTCACGAGAATTCTTTACTTGCATCTGGCTCTCGAGCAGACATTGGAGATTGGCAGCTACATTTAAAATCAATGGATAATCTGGAAATGCATTATTCTGGATTTCGCACACCTCACTATCACAATTTGTCTGATCTTGTTGAGGAAAATCTTGCATCGCAAATAAGAAAGCATACCAAACTGCAGCTATCCGACTCATCAGATGATTCTCCCAATGTGTTAGTTTTTCAGATTATTGGTGGCTTTCCTTTCACGACAGATATTGTACTTATCTCTGGAACTGATTCCGAAAGTTCAAGAGTAGAAGAGCGTGTCAGCAGTCTTACAGGCACCTCACTCTCTAATCAACTGAAATACAAAGAACAAGCATTTGATGAAAAGTTCGAGAAAATTTTTAATTTGGCTGAGAAGGTGGATTCAGAATTTATATCTGTTGGTAAGGCTGCTGTCGGAAACCTTTTAGGAGGCATTGGCTACTTCTATGGCCAGTCAAAAATTGCTCTGCCAAGAATCCTTAATCTTAGAGAACATGTTAATTATATATCATATTGGCCGGCTGAGCTATACACAGCTGTACCAAGTCGATCTTTCTTTCCAAGAGGATTTTTATGGGATGAAGGTTTCCATCAACTTCTAATCTGGCGTTGGGATATTCATATTTCATTGGATATCATTGGACACTGGTTAGATTTGATGAACGTTGATGGATGGATACCACGTGAGCAAATTCTGGGTGCTGAAGCACTGAGTAGGGTCCCTGAGAAATTTGTTCCTCAGCATCCAACTAATGGAAATCCTCCAACTCTATTTTTGGCATTAAATGATATAATTAACGGCTTGAAGAAAAATGAATTTGCTGCAATTGATAGAAATGAGATCTCCCTGTTCCTGGAGCGTGCCTTTGTTCGATTAGAAGCATGGTTTGAATGGTTCAATACAACTCAGTCAGGGAAACAGATGAGCAGCTACTATTGGCATGGACGGGACAATAGGACAATGCTTGAATTAAATCCCCAGACACTGTCCTCTGGATTCGATGATTATCCTCGTGCTTCACACCCAAGTTCAGATGAACGCCACTTAGATCTTAGATGTTGGATGTTACTTGCAGCAGAATGTATGCATTCCATTAAAGAGTTGTTGGATAAGGAAACCAAACCTGGCAAGGATTATGGTTCTACTGCAAAATTGCTATCTGATCATGAGTTACTGAACCAGATGCATTTTGACGATACATTTGGTGCTTACTTTGACTTTGGAAATCATACAGAAAAGGTTCAACTTAAATGGAAAGAAGTGGAGACAGGACAGAATTATGCTGGACGCCAGCTTGTCCGTGATGTTTTGGAGAGGCCTGTGCTGAGATTCGTTCCTCACATTGGTTATGTTAGTTTGTTCCCATTCATGGGGAGGATCATTCCATCTGGATCATGGGTTCTGGAAAAGCAGCTTGAACTCATCTCAAATCACAGCCACTTATGGACGGACTTTGGTCTTCTTTCTCTTGCCAAATCAAGTTCCATGTACATGAAACGCAACACAGAGCATGACCTTCCATATTGGAGAGGTACAATTTGGATAAACATGAATTACAGAATTCTTTCAGCTCTCCACCATTACTCCAAAGAGGATGGACCATATCAAGACAGAGCAAAAGCTATCTACAAAGAATTGAGAAGCAATTTAATTAGAAATATAGCTCGCAATTATCAACAGACTGGATTTTTTTGGGAACAGTACGAGCAGGTTAAGGGCAAGGGAAAAGGGGCACATCCATTTACGGGTTGGACATCACTTGTAGTATTAATCATGGCGGAGACTTATGGCACAATTTAG 2559 0.433 MTGSGRTTARSRLRSSSSSDAADPLRERRPRLNRHARSKYGSSIPLFNNTNLKVVLAFSFLAFFLIWFLIHHLVNSVAQPGLPREVTPFPAPKIMDLPQFQGQHKESLYWGTYRPHVYLGIRARTPQSLIAGLMWIGVKDGRYHLRHVCKQEDELSTYGWIKHDGRDFGHQVLADHGMTLTTEFLKSKGDGSGYGGDWAVRIGVQVDKSKWNEEFGRGAQLFFYLADEGGNALDVSRENLNIHENSLLASGSRADIGDWQLHLKSMDNLEMHYSGFRTPHYHNLSDLVEENLASQIRKHTKLQLSDSSDDSPNVLVFQIIGGFPFTTDIVLISGTDSESSRVEERVSSLTGTSLSNQLKYKEQAFDEKFEKIFNLAEKVDSEFISVGKAAVGNLLGGIGYFYGQSKIALPRILNLREHVNYISYWPAELYTAVPSRSFFPRGFLWDEGFHQLLIWRWDIHISLDIIGHWLDLMNVDGWIPREQILGAEALSRVPEKFVPQHPTNGNPPTLFLALNDIINGLKKNEFAAIDRNEISLFLERAFVRLEAWFEWFNTTQSGKQMSSYYWHGRDNRTMLELNPQTLSSGFDDYPRASHPSSDERHLDLRCWMLLAAECMHSIKELLDKETKPGKDYGSTAKLLSDHELLNQMHFDDTFGAYFDFGNHTEKVQLKWKEVETGQNYAGRQLVRDVLERPVLRFVPHIGYVSLFPFMGRIIPSGSWVLEKQLELISNHSHLWTDFGLLSLAKSSSMYMKRNTEHDLPYWRGTIWINMNYRILSALHHYSKEDGPYQDRAKAIYKELRSNLIRNIARNYQQTGFFWEQYEQVKGKGKGAHPFTGWTSLVVLIMAETYGTI* 853
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja4g1059 852 Pfam Glycosyl hydrolase family 63 C-terminal domain 350 847 IPR031335 -
Lja4g1059 852 MobiDBLite consensus disorder prediction 1 20 - -
Lja4g1059 852 SUPERFAMILY Six-hairpin glycosidases 358 850 IPR008928 GO:0005975
Lja4g1059 852 Gene3D - 95 376 IPR038518 -
Lja4g1059 852 Pfam Glycosyl hydrolase family 63 N-terminal domain 107 270 IPR031631 -
Lja4g1059 852 PANTHER ALPHA-GLUCOSIDASE 2 82 850 - -
Lja4g1059 852 PANTHER MANNOSYL-OLIGOSACCHARIDE GLUCOSIDASE 82 850 IPR004888 GO:0004573|GO:0009311
Lja4g1059 852 MobiDBLite consensus disorder prediction 1 34 - -
Lja4g1059 852 Gene3D - 377 850 IPR012341 GO:0005975
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja4g1059 83 849 Glycoside Hydrolase AT1G24320 58.724 0.0 949
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja4g1059 K01228 - gmx:100795691 1473.76
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja4g1059 4 9108783 9116756 Lja4g1059 4 9108783 9116756 ECH