Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja4g1053 ATGAACCTCGCTGCGGTTTACGGAGTCCGTACCCCCGGCGACGCCACCGCCTGGAAATTCCTGTTCTTCCTCGCCGTCATGTACTACATCATGTCCATGCTGACCTACTCCATCCTCCACATGGAGTTCATCGCCCCGCTCCCACACGACGCGCCTCTCGATCGATTCTCCGAAGCCAGAACCGTCGAACATGTTCGAATCTTGTCTCAAGAGATCGATGGTCGTCAAGAAGGGCGACCTGGATTGAAAATGGCAGCTCAATACATTAAGGGCCAATTGGAAGTACTGAAGGAACGAGCTAGCTCCAATGTCAGAATTGAGATTGAGGAGACCACTGTCAGTGGCTCCTTCAATATGCACTTTTTGGGTTTCAATTTGGCTCTGGTATACAGAAATCATACTAATATTGTTATGAGGATATCATCTATAGATTCCAAAGATACTGATCCATCAGTTTTAGTGAATGGGCACTTTGATAGCCCCCTTGGTTCTCCTGGTGCTGGTGATTGTGGTTCATGTGTTGCATCAATGCTGGAAATTGCTAGACTAACTGTGGACTCTGGTTGGGCTCCCCACCGCCCAGTTATTTTCCTCTTCAATGGTGCCGAGGAACTTTTCATGTTGGGTTCACATGGGTTCATGAAGACACATAGATGGCATGACACTATAGGAGCTTTTGTAAATGTGGAGGCATCTGGAACTGGAGGGCCTGATTTAGTTTGCCAATCTGGACCTAGTTCCTGGCCTTCTAATATCTATGCAGAAGCAGCAATATACCCCATGGCTAATAGTGCAGCTCAGGATGTTTTTCCTGTTATTCCTGGAGATACAGATTACCGAATATTTTCCGAAGACTATGGAAATATTCCTGGGCTTGACATTATCTTTCTCCTTGGTGGTTATTTTTACCATACCTCCTATGATACTGTAGAGCGACTCATACCTGGAAGCATCCAAGCACGTGGAGAGAATTTGTTCAGCATAATCAAGGCTTTTACTAATTCTCCTAAGTTACAAAACACCTATCAAACAAATTATAGTGAAGTTACTCCCAGCTTAGTCCAGGATGAGCGTGCTATTTTCTTTGATTATCTCTCATGGTTTATGATATTTTATTCCAGAAGGGTTGCTAAAATTCTTCACAGTATTCCTATCTTCTTCTTCCTTCTTATGTCCTTTGTGCATGGTAGGTCGCATTCTCCGTTGGCAACTTTGTGTGATTTTGTGAAAGGAATTTTGTTCCATGCTGTTGGGATTATATTGGCTATTATTGTGCCTGTTTCATTTTCTTTGCTGAGATTACTGTTCTCTTCTCAGACAATGAATTGGTTTGCTCATCCATACTTGGCTTTCAATATGTTTGTACCTTGCTCACTTGCTGGTCTTTTAATTCCAAGAGTTATCTGGAGATCTTTTCCTCTTTCTCAAGATGTTTCTATTGTCAAGACATCAAAAGAGGCACTATCTGATGAAGCAAGGTTCTGGGGTGCATTTGGGTTCTATGCCGTACTAACTTTGGGTTATCTTGTATCTGGATTGAGTGGAGGTTTCATTACTTTTTTTGTGTCTGCTTCCATGCTTCCGGCATGGATATCCTTCTGCTTATCGGTCAAATTCTTTGGACAGCGGTCACTCAGGTCAACAATGTTTTACATATTACCTCTAGTCCCATTCCTTGCATATGCTGTTTATTTTGGTGGCTTTCTTGCCCAATTTCTGATAGAGAAGATGGGCATGATGGGTTCTCTTCCTCTACCATATGGGCACTATGTTCCTGACGTTATCGTGGCTGCATTAATTGGATTAGTAACTGGTTGGTGCACGGGCCCTCTAATGCCCATTTGTGGTCATTGGTTAGCTAGGTCCTCCATGTTGAGTTCTCTGCTGCATCTTAGTGTCCTGGGCTTGGCCATATCTTCTCAGTTTTTTCCTTACACCATGTCTGCACCTAAGAGGATCGTTTTTCAACATGCTTTCCGTACTTCAGGCTCAAGTGAGATTGTGGAATCCACCTACGATTTTTCTGTAACTGACTCCAATTCTTTACTATTCCTCTTCAAACACTCACCTGAAGTGGCAGAGAAATTGAATATTACTTCAGAGTTTTCATTTGAATCTGCATCGCTGTCTAAACGTCAGGATTGGATGGCAATTTTTCCAGTTTCTTTTCTCTTCTCAAATAGTCTGAAGTTCCCTGCAAAAGGGGATGATATTTTGAAGCAGTATGAGTTCTTTCCCAAATTGTCTGTTCAAAATACATCTCTAAACTCTGAAAAGGGACCGAGAAGAGTTCACTTGGAGCTTTACTTAGGTTCCTTAGAAGAGGTCTGGGTTGCCGTTCTTAACATCACTGGTCCTTTATCCAGTTGGTCTTTTGCAGATAATGTGCTTCCAGGAACTGAAACTTATGGAGGTGGTCCACCATCATATATATGCCGGTTTAGCGGACCCAGTGATAGGAATTGGACATTCTGGTTAGAGGCTAATAGCTCTGAAGCTTTGAGAGTGGATCTCACAGTTTTAGACCAAAAGTTGGTTGATCCAGCAAAGAGATTGAAGGATCTTTTCCCTAACTGGGTTGATGTCATTGCCTATTCTAGTTTTATGTCCACCTATACCTTTTAA 2625 0.4267 MNLAAVYGVRTPGDATAWKFLFFLAVMYYIMSMLTYSILHMEFIAPLPHDAPLDRFSEARTVEHVRILSQEIDGRQEGRPGLKMAAQYIKGQLEVLKERASSNVRIEIEETTVSGSFNMHFLGFNLALVYRNHTNIVMRISSIDSKDTDPSVLVNGHFDSPLGSPGAGDCGSCVASMLEIARLTVDSGWAPHRPVIFLFNGAEELFMLGSHGFMKTHRWHDTIGAFVNVEASGTGGPDLVCQSGPSSWPSNIYAEAAIYPMANSAAQDVFPVIPGDTDYRIFSEDYGNIPGLDIIFLLGGYFYHTSYDTVERLIPGSIQARGENLFSIIKAFTNSPKLQNTYQTNYSEVTPSLVQDERAIFFDYLSWFMIFYSRRVAKILHSIPIFFFLLMSFVHGRSHSPLATLCDFVKGILFHAVGIILAIIVPVSFSLLRLLFSSQTMNWFAHPYLAFNMFVPCSLAGLLIPRVIWRSFPLSQDVSIVKTSKEALSDEARFWGAFGFYAVLTLGYLVSGLSGGFITFFVSASMLPAWISFCLSVKFFGQRSLRSTMFYILPLVPFLAYAVYFGGFLAQFLIEKMGMMGSLPLPYGHYVPDVIVAALIGLVTGWCTGPLMPICGHWLARSSMLSSLLHLSVLGLAISSQFFPYTMSAPKRIVFQHAFRTSGSSEIVESTYDFSVTDSNSLLFLFKHSPEVAEKLNITSEFSFESASLSKRQDWMAIFPVSFLFSNSLKFPAKGDDILKQYEFFPKLSVQNTSLNSEKGPRRVHLELYLGSLEEVWVAVLNITGPLSSWSFADNVLPGTETYGGGPPSYICRFSGPSDRNWTFWLEANSSEALRVDLTVLDQKLVDPAKRLKDLFPNWVDVIAYSSFMSTYTF* 875
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja4g1053 874 PANTHER METALLOPEPTIDASE M28 FAMILY MEMBER 12 872 IPR045175 GO:0006508|GO:0008235
Lja4g1053 874 Gene3D Zn peptidases 57 337 - -
Lja4g1053 874 CDD M28_Fxna_like 53 372 - -
Lja4g1053 874 Pfam Peptidase family M28 135 325 IPR007484 -
Lja4g1053 874 PANTHER BNAA07G25020D PROTEIN 12 872 - -
Lja4g1053 874 SUPERFAMILY Zn-dependent exopeptidases 45 336 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja4g1053 - - gmx:100796569 1524.61
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja4g1053 4 9051148 9060140 Lja4g1053 4 9051148 9060140 ECH