Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja4g1052 ATGTATGGCAAAGTGGTTCTCTCATTCATCTTCGTCTTCTTGCTCATCCTCTCTTACTCAATCTTCATCGGCACACTCGACATTCGATCTTATTTCTCCCCAATCTTAATCCCACCTTCAACTGGACCCGAATCCAAACCCGTTCAGTGCGAACCCGACCCGCAGCCACTTCGCGTCTTCATGTACGATCTCCCTCGCCGATTCAACGTCGGGATGATGACTCGCCGGAACGATACGCCGGAATCCGCTGTCACCGTCCGGGACTGGCCGCCGTGGCCTGAGAATTGGGGGCTGAAGATGCAGCATAGTGTTGAGTACTGGATGATGGGCTCGCTTCTGTACGAAGACGGTCAGCGCGGAGAGGCGGTTAGGGTTTTGGATCCGGAGCTTGCTGATGCGTTCTTTGTACCGTTTTTCTCTTCGTTGAGCTTCAATACGCATGGCCACACTATGAAGGATCCCGCCACGCTGATTGATCGCCAATTGCAGGTTGACTTAATGGAACTCTTAAAGAAATCTGTACACTGGCAGAGGTCTAGAGGTAGAGATCACGTATTTCCTATGACACACCCAAATGCCTTTAGGTTCCTAAGAAATCAATTGAATGAGTCTATTCAGGTTGTTGTGGATTTTGGCCGCTACCCCAAAGGCATGTCTAATTTGAACAAAGATGTGGTGTCCCCATATGTGCATGTTGTGGATTCTTTTACGGATGACGAGCCTCAAGATCCGTACGAGTCACGCCCCACGCTGCTTTTCTTCCGAGGGAGGACTTTTAGGAAGGATGAAGGCATTGTCCGTGCTAAACTAGCAAAGATATTGACTGGTTTTGATGATGTTCACTACGAGCGAAGTTTTGCTACAGGAGAAAACATAAAATTGTCATCACAAGGGATGCGTTCATCGAAGTTTTGTTTGCATCCAGCCGGAGATACACCATCATCTTGTCGTCTTTTTGATGCCATTGTTAGTCACTGTGTTCCTGTCATTGTGAGTGACCAGATTGAACTCCCGTTTGAGGATGAGATTGACTACTCCCAGTTCTCGTTGTTCTTCTCTTTCAAAGAGGCATTACAGCCTGGCTACATGATCGACCAGCTTCGTAAATTTCCAAAGGATAAATGGTCTGAAATGTGGAGGCAGCTTAAAAATATCTCCCATCATTATGAATTCCAGTACCCTCCGAAAAAGGAAGATGCTGTTAATATGCTGTGGAGACAGGTTAAGCACAAGCTTCCAGGGGTAAGACTCTCTGTTCACAGAAGCCGAAGGTTAAAAATCCCAGATTGGTGGAAGAAAAAATGA 1305 0.469 MYGKVVLSFIFVFLLILSYSIFIGTLDIRSYFSPILIPPSTGPESKPVQCEPDPQPLRVFMYDLPRRFNVGMMTRRNDTPESAVTVRDWPPWPENWGLKMQHSVEYWMMGSLLYEDGQRGEAVRVLDPELADAFFVPFFSSLSFNTHGHTMKDPATLIDRQLQVDLMELLKKSVHWQRSRGRDHVFPMTHPNAFRFLRNQLNESIQVVVDFGRYPKGMSNLNKDVVSPYVHVVDSFTDDEPQDPYESRPTLLFFRGRTFRKDEGIVRAKLAKILTGFDDVHYERSFATGENIKLSSQGMRSSKFCLHPAGDTPSSCRLFDAIVSHCVPVIVSDQIELPFEDEIDYSQFSLFFSFKEALQPGYMIDQLRKFPKDKWSEMWRQLKNISHHYEFQYPPKKEDAVNMLWRQVKHKLPGVRLSVHRSRRLKIPDWWKKK* 435
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja4g1052 434 Pfam Exostosin family 55 363 IPR040911 -
Lja4g1052 434 PANTHER EXOSTOSIN HEPARAN SULFATE GLYCOSYLTRANSFERASE -RELATED 1 426 IPR004263 GO:0006486|GO:0016757
Lja4g1052 434 PANTHER EXOSTOSIN-LIKE 1 426 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja4g1052 Lja-Chr4 9045353 9048687 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja4g1052 - - gmx:100797646 734.176
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja4g1052 4 9045353 9048687 Lja4g1052 4 9045353 9048687 ECH