Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja4g1049 ATGGCCACTACTGAGGGAGAGGTTGAGAGAAAGACTCATCAGGAACTGAAGCATCTTGGATTTGTGAAAATTGCTGCGATTCAAGCTTTCGTGTGCGTCACGAATCTCTACGAATACGCCAAGCAGAACAGTGGACCGTTGAGATCCGCTGTCGGAACCGTCGAAGGGACCGTAACCACCGTTCTCGGCCCTGTTTACAACAAATTTAAGGGCGTCCCCAATGATCTGCTTGTTTTTGCAGACAATAAGGTGGAGGAAGGTACCCACAAATTCGATGAGCATGCCCCTCCTGTTGTAAAGCAGATTGTGAACCAAGCTAAGGGTTTGGTTCATCAAGTGTCACACAAAGCGGAGAAAGTTGTGAGTGAGGCTCATTCTGGAGGGGCTAAAGCAGCAGCACACTATGTTGCTGCAGAGTCTAAGCAAATTGTGGTGACTGGATCAGTGAAACTGTGGTCTGGTCTGAACCACTACCCGCCCTTCCATGCAGTGGCAGAGTTTGCTGTTCCTACCGCCGCACACTGGTCAGAGAAGTACAACAAAGTGATGAAGAACATGACTGGGAAGGGATTTGCTGTGTTTGGGTATTTGCCTTTGATTCCCATTGAGGACATAGCTAAGGCATTTAAACAAGGAGAAAACAATGTGAATGGAGATGAAGCGAGAACAGAATCCTCATCTGACTCGGAATGA 693 0.4776 MATTEGEVERKTHQELKHLGFVKIAAIQAFVCVTNLYEYAKQNSGPLRSAVGTVEGTVTTVLGPVYNKFKGVPNDLLVFADNKVEEGTHKFDEHAPPVVKQIVNQAKGLVHQVSHKAEKVVSEAHSGGAKAAAHYVAAESKQIVVTGSVKLWSGLNHYPPFHAVAEFAVPTAAHWSEKYNKVMKNMTGKGFAVFGYLPLIPIEDIAKAFKQGENNVNGDEARTESSSDSE* 231
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja4g1049 230 PANTHER REF/SRPP-LIKE PROTEIN OS05G0151300/LOC_OS05G05940 4 227 IPR008802 -
Lja4g1049 230 PANTHER RUBBER ELONGATION FACTOR-RELATED 4 227 - -
Lja4g1049 230 Pfam Rubber elongation factor protein (REF) 12 211 IPR008802 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja4g1049 Lja-Chr4 8987978 8989729 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja4g1049 - - gmx:100499806 324.324
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja4g1049 4 8987978 8989729 Lja4g1049 4 8987978 8989729 ECH