Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja4g1044 ATGCAAGTCAACGAGAAAATGAAGAACCGCTATCACCTTGGTGAGAAACGCTACTTCCTGTGGGTGGTGGCGGTGTTGGGCTTCATCGGAGCCTCACTCTTCACGGTGAGCCTCCTCCGAACCTCAGACACCGATTTCCTCTGCGCCATCACCCGAACCAAAACCACAGGTTCGGGTGGTAACCAGCACCATACCGAACCAGCGTCACCGATCCAGCTCCGTGCGATCCTCCACTACGCGACGTCGCACGTGGTCCCACAACAATCAATCCACGAGATCACCGTCACGCTGGATGTGCTGAAATCCCTAAACCGCCCCTGCAACTTCCTCGTGTTCGGTTTGGGCCACGATTCGCTCATGTGGGCCAGCCTCAACGCCGCCGGCAAAACGCTCTTCCTCGAGGAGGATCCGAAATGGGTTCAAACCGTCCTCAAGGACGCGCCGGAGCTTCACGCGCGGACGGTCAATTACCGAACTCAGCTTCAGCAAGCCGATGAGCTTCTCCACTGGTACAAATCGGAGCCGCGGTGTTCGCCGGCGAAGGCCATGCCGCTGCGGGGGAATGAACAGTGTAGATTGGCCTTGCATAATCTTCCTGATGAGGTTTATGATACTGAGTGGGACCTGATCATGATCGATGCGCCGAGGGGGTACTTTGCGGAGGCGCCGGGGCGGATGGCGGCGATCTTCTCGGCGACGGTGATGGCGAGGAATAGGAAGGGATCCGGTGTGACGCACGTGTTTCTGCACGATGTGGATCGGAAGGTTGAGAAGGTTTTTGCTGAGGAGTTTCTGTGTAGGAAGAATCTGGTGAAAGGTGTTGGTAGACTCTGGCATTTCGAGATTGCATCTCAGATTCATGGTGGTGATGATGGTGGTGCTCGATTCTGCTAG 894 0.5626 MQVNEKMKNRYHLGEKRYFLWVVAVLGFIGASLFTVSLLRTSDTDFLCAITRTKTTGSGGNQHHTEPASPIQLRAILHYATSHVVPQQSIHEITVTLDVLKSLNRPCNFLVFGLGHDSLMWASLNAAGKTLFLEEDPKWVQTVLKDAPELHARTVNYRTQLQQADELLHWYKSEPRCSPAKAMPLRGNEQCRLALHNLPDEVYDTEWDLIMIDAPRGYFAEAPGRMAAIFSATVMARNRKGSGVTHVFLHDVDRKVEKVFAEEFLCRKNLVKGVGRLWHFEIASQIHGGDDGGARFC* 298
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja4g1044 297 Pfam Polysaccharide biosynthesis 92 280 IPR021148 -
Lja4g1044 297 PANTHER OS11G0490100 PROTEIN 7 297 IPR006514 GO:0045492
Lja4g1044 297 Gene3D Vaccinia Virus protein VP39 87 288 IPR029063 -
Lja4g1044 297 TIGRFAM A_thal_3515: uncharacterized plant-specific domain TIGR01627 74 286 IPR006514 GO:0045492
Lja4g1044 297 PANTHER POLYSACCHARIDE BIOSYNTHESIS PROTEIN 7 297 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja4g1044 Lja-Chr4 8926740 8927965 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja4g1044 - - gmx:100820087 395.201
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja4g1044 4 8926740 8927965 Lja4g1044 4 8926740 8927965 ECH