Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja4g1034 ATGGCGGCAGATTGGGGTCCGGTGGTGATCTCGGTGGTGTTGTTTGTACTACTGAGCCCAGGGCTGCTGTTTCAGCTGCCGGGGAGGGGCAAGGTGGTGGCGTTTGGGAGCATGCAAACTAGTGGGCTTTCTATCTTGGTCCACACCATCATCTTCTTTGGACTCATCACCATCTTTCTACTTGCAGTTGGGGTGCATATCTACTCAGGATAA 213 0.5305 MAADWGPVVISVVLFVLLSPGLLFQLPGRGKVVAFGSMQTSGLSILVHTIIFFGLITIFLLAVGVHIYSG* 71
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja4g1034 70 Pfam Protein of unknown function (DUF3339) 3 68 IPR021775 -
Lja4g1034 70 PANTHER OS05G0103400 PROTEIN 1 70 IPR021775 -
Lja4g1034 70 PANTHER PROTEIN, PUTATIVE-RELATED 1 70 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja4g1034 Lja-Chr4 8828516 8829054 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja4g1034 - - gmx:100777861 127.102
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja4g1034 4 8828516 8829054 Lja4g1034 4 8828516 8829054 ECH