Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja4g0778 ATGTCCGGCGCCGGCGACGTGGACGATGATGCGATGCTCAGCGACGTCGAGGACGACACCGCCGCCGATCCAATTCCGCCTCCCTCACCGGAAAACATCTCCGAGGAAAAACTCCGGGAGATTCTAACCGAGCTCGATCAGGAACGAAAGGCCCGCCTCGCCGCGGAGAATTCCAAGTCCGAATTGCAGGTTTCCTTCAACCGGTTGAAGGCTCTCGCTCACGAGGCCATCAAGAAGCGCGACGAGTTCGGGCGGCAGAGGGACGATGCTGTTAAGGAGAAGGAGGAGGTGGCGAAGCAGGTTGAGGAGGTGGTGAAGGAGCGGGATGCGCTGCGATCGGAGATTGGGAACTCGAGTCATATGTTGGTTACTGGTATGGAGAAGATCTCGGCGAAGGTGAATGGTTTTAGCGGCGGCGCGTTGCCGAGGTCGCAGAAGTATACCGGGATGGCGGCGGTGGTGTATGGTGTGATTAAGAGGGCGAATGAGATCGTGGAGGAGCTGCTGAGGCAGAATGATGCCACCGGCAAGGCGAGGGATCAAGCTAGGGAGCAGATTGAGCAGAGGAATTACGAGATTGCGATTGAGGTTTCTCAGCTTGAAGCAACCATTAGTGACTTGAGGGATGAGGTTGCCAAAAAGGATTCTGCAATTGAGGGTTTGGAGAAGGATTTGGGTGTTAGGGATTTGAAACTGAGTGAGGTTTCTGAGAGTTTGAGAAAGGAACAAGGTGAGGTTATGCAGTTGAAGGACCATGTTGGTGAGTATGAGGTTAAGTTTAGTAAGTTGGAGTCTCAGATGGAATCGCTTAGACCGATGTTGATTGATCAGTTGAGCTTTGTTTCGAAAATTCACAACCAGATTTGCAATGTTGTCAGGACGTTGACGATCGATGATGAGTTGGGTAATTTGGAATTGTCCGAATCGTTGTTTGTCCCGCAAGAAACGGACATTGAGGAGAATGTACGGGCGTCTTTGGCTGGGATGGAATCCATACATGAGTTGACTAGGATTGTTGTTCAGAAAGCTAGGGATGTGGTTGAGGAGAAGAATCGCGAGATCAAGAGTTTGGATGAGACTGTGAATCGGTTAGTTACGGAGAAGGATCAAATTGGTTCTTTGCTTCGGAGTGCGTTGTCAAAGAGAATGGCATCTGATCCATCTTCTAGGAAAAATGAGTTGTTTTTAGCTGCTGAGAATGGGTTGAAGGATGCTGGTATAGATTTCAAATTTAGTAAGCTTCTTGGAGATGGGAAGCTTGCAACATCAAATGATAAAGAAGAGGAGGATGAAATATACTCTCTGGCTGGTGCTCTGGAGGATGTTGTTAAGACATCTCAGCTTGAGATCATAGAGCTCAAGCATACTGTGGATCAATTAAGGGCAGAGTTGAGTTTACTTAAGCTGCACATAGAAGCTCAGACCAAAGAGCTTGACCAAAGAATGCTTCGGATAGAGGAACTTGAAGAGAAGGAGAGGGTGGCAAATGAAAATATTGAAGGGCTAATGATGGATATTGCTGCTGCTGAAGAAGAAATTAACAGATGGAAAGATGCAGCAGAGCAAGAAGCTGCTGCAGGCAGGGGTGTTGAACAAGAATTTGTGGCACAGTTGTCAACACTAAAGCACGAGCTTGAAGAGGCAAAGCAGGCCATGTTGGAATCAGAGAAGAAACTAAAATTCAAAGAAGAGACAGCAGCAGCTGCCATGGCAGCCAGAGATGCAGCAGAGAAATCTCTTAGGTTGGCAGACACGAGGTCTTCCAGACTAAGGGACAGAGTAGAGGAGCTCACTCATCAGCTCGAAGAATTTGAGAACAGGGAAGACTCAAGGGGAGGAAATAGGCCTAGATATGTGTGCTGGCCATGGCAGTGGCTCGGCATGGACTTTGTCGGATATCAGCCTCGGCGGCTTGATACACAACAGGAGGCTTCTAATGAAATGGAACTTTCCGAACCTCTCTTATAA 1968 0.4842 MSGAGDVDDDAMLSDVEDDTAADPIPPPSPENISEEKLREILTELDQERKARLAAENSKSELQVSFNRLKALAHEAIKKRDEFGRQRDDAVKEKEEVAKQVEEVVKERDALRSEIGNSSHMLVTGMEKISAKVNGFSGGALPRSQKYTGMAAVVYGVIKRANEIVEELLRQNDATGKARDQAREQIEQRNYEIAIEVSQLEATISDLRDEVAKKDSAIEGLEKDLGVRDLKLSEVSESLRKEQGEVMQLKDHVGEYEVKFSKLESQMESLRPMLIDQLSFVSKIHNQICNVVRTLTIDDELGNLELSESLFVPQETDIEENVRASLAGMESIHELTRIVVQKARDVVEEKNREIKSLDETVNRLVTEKDQIGSLLRSALSKRMASDPSSRKNELFLAAENGLKDAGIDFKFSKLLGDGKLATSNDKEEEDEIYSLAGALEDVVKTSQLEIIELKHTVDQLRAELSLLKLHIEAQTKELDQRMLRIEELEEKERVANENIEGLMMDIAAAEEEINRWKDAAEQEAAAGRGVEQEFVAQLSTLKHELEEAKQAMLESEKKLKFKEETAAAAMAARDAAEKSLRLADTRSSRLRDRVEELTHQLEEFENREDSRGGNRPRYVCWPWQWLGMDFVGYQPRRLDTQQEASNEMELSEPLL* 656
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja4g0778 655 Coils Coil 340 367 - -
Lja4g0778 655 Gene3D - 148 273 - -
Lja4g0778 655 Coils Coil 443 526 - -
Lja4g0778 655 PANTHER OS08G0559800 PROTEIN 1 655 IPR040300 -
Lja4g0778 655 Coils Coil 197 224 - -
Lja4g0778 655 MobiDBLite consensus disorder prediction 1 37 - -
Lja4g0778 655 Coils Coil 531 565 - -
Lja4g0778 655 Coils Coil 587 607 - -
Lja4g0778 655 Coils Coil 87 114 - -
Lja4g0778 655 Coils Coil 165 185 - -
Lja4g0778 655 PANTHER PARAMYOSIN 1 655 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja4g0778 Lja-Chr4 6457741 6461910 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja4g0778 - - gmx:100800693 983.786
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja4g0778 4 6457741 6461910 Lja4g0778 4 6457741 6461910 ECH