Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja4g0769 ATGGAGGCGTTGACAGAGAAACAGAGACAAATGGTGTCGTGGGTTGCAATTTCAACAACACTAGCTCTATTACTAGTGCCTTGTCCTGTCTCCTGTGAAAGGCAGTGCAATTTTCCGGCAATATTCAACTTCGGAGACTCCAATTCCGACACTGGTGCTATCTCAGCAGCTTTTGAACAAGCTCCTCCCCCTAATGGAATCACTTTTTTCCACAACCCTGCTGGGCGCTTCTCCGATGGTCGTCTTGTCATCGATTTCATAGCTAAAAGCTTTGGATTACCTTATCTGAGCGCTTACTTGGATTCTGTTGGCTCAAACTTCAGCACTGGAGCTAACTTTGCAACCGCCGGATCCACCGTCAGACCTCAGAACACAACCAGGTCTCAGAGTGGTTATAGTCCCATATCGCTGGATGTTCAGTTTGAACAGTTCTCTGGTTTCAAATCAAGATCCAAACTCGTTCGCAAACAAGAATTTGTTGCCCAAGAGTATTTTTCTGAGGCACTATACACGTTTGATATTGGCCAAAACGATCTCACTGCTGGGTTGAAACTGAACTTAACCACAGAACAAGTCAAGGCATATATACCTGATGTATTAGGCCAATTCTCCAATGTCATAAAGAATGTGTATGGGGAAGGAGGAAGGTCATTTTGGATACACAACACAGGCCCACTGGGTTGCCTGCCATACACGCTAGACCGCTATCCCGTGAGTGCGGCCCAAATCGATGAGTTTGGGTGTGCCAAACCCTTCAATGAGATGGCCCAATATTTTAACAGTAAACTGAAAAAAACTGTTGAGCAACTGAGGATAGAACTTCCAAAGGCTGCAATAGTGTACGTTGATGTGTACACAGCGAAGTACACCCTCATCACCCATGCCCAAAAATACGGTTTTGACAAGGGGGTGATAGCATGTTGTGGGCATGGTGGGAAGTACAACTTTAACAATGGAGCGAGATGTGGAGCGAGCAAAATGGTGAATGGGAAAAAAGTTGTGATAGCCAAATCGTGCAAAGATCCAAGTGTGAGGATTCTTTGGGATGGGATTCATTACACTGAAGCTGCTAATAACTGGGTCTTTCAACAAATAGCCAATGGATCCTTTTCAGATCCACCTATGTCTTTAACAAGGGTTTGTCATGGCAACGCATCTATCCCCTACCATTAA 1173 0.4493 MEALTEKQRQMVSWVAISTTLALLLVPCPVSCERQCNFPAIFNFGDSNSDTGAISAAFEQAPPPNGITFFHNPAGRFSDGRLVIDFIAKSFGLPYLSAYLDSVGSNFSTGANFATAGSTVRPQNTTRSQSGYSPISLDVQFEQFSGFKSRSKLVRKQEFVAQEYFSEALYTFDIGQNDLTAGLKLNLTTEQVKAYIPDVLGQFSNVIKNVYGEGGRSFWIHNTGPLGCLPYTLDRYPVSAAQIDEFGCAKPFNEMAQYFNSKLKKTVEQLRIELPKAAIVYVDVYTAKYTLITHAQKYGFDKGVIACCGHGGKYNFNNGARCGASKMVNGKKVVIAKSCKDPSVRILWDGIHYTEAANNWVFQQIANGSFSDPPMSLTRVCHGNASIPYH* 391
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja4g0769 390 Pfam GDSL-like Lipase/Acylhydrolase 41 365 IPR001087 GO:0016788
Lja4g0769 390 PANTHER ZINC FINGER FYVE DOMAIN CONTAINING PROTEIN 36 382 - -
Lja4g0769 390 CDD SGNH_plant_lipase_like 39 369 IPR035669 -
Lja4g0769 390 PANTHER BNAA06G32900D PROTEIN 36 382 - -
Lja4g0769 390 Gene3D SGNH hydrolase 30 369 IPR036514 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja4g0769 Lja-Chr4 6409111 6411482 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja4g0769 39 382 Acyl Lipid Metabolism Gene Families AT4G10950 29.132 3.22e-37 137
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja4g0769 - - var:108335696 608.601
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja4g0769 4 6409111 6411482 Lja4g0769 4 6409111 6411482 ECH