Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja4g0701 ATGTTCATTGAGAGTTTCAAGGTTGAGAGTCCTAACGTGAAGTACACTGAGACTGAGATTCAGTCCGTGTACAACTATGAAACCACTGAGCTTGTTCACGAGAACAAGAACAACGCTTACCAGTGGGTTGTTAAACCCAAGACTGTCAAATATGAATTTAAAACCAAAACCAATGTCCCTAAACTTGGGGTAATGCTTGTGGGATGGGGTGGAAACAATGGTTCAACACTCACTGGTGGTGTTATTGCTAACAAAGAGGGTATTTCATGGGCAACAAAGGACAAGATTCAACAGTCCAATTACTTTGGTTCTCTGACTCAGGCATCAGCTATCAGAGTGGGGTCTTTCCAAGGGGAAGAAATCTATGCCCCATTCAAGAGCCTGCTTCCAATGGTGAACCCTGATGACATTGTGTTTGGAGGATGGGATATCAGCAACTTGAACCTGGCTGATGCCATGGCCAGAGCCAGGGTCTTTGACATTGACCTGCAGAAACAATTAAGGCCTTACATGGAATCCATGGTTCCACTCCCCGGAATCTATAACCCGGATTTCATTGCTGCCAACCAAGGAGAGCGTGCCAACAATGTCCTCAAAGGCACCAAGAAAGAACAAGTTCAACAAATCATCAAAGACATCAAGGAGTTTAAGGAAGCCAACAAGGTTGATGAGATTGTTGTCCTGTGGACTGCCAACACTGAGAGATACAGTAATGTAGTTGTGGGACTAAACGACACTGAGGAAAACCTCTTGGCTTCCTTGGACAGGGATGAGGCTGAGATTTCCCCTTCCACCTTGTATGCCATAGCTTGTGTCATGGAAAACATTCCTTTTATCAATGGAAGCCCTCAGAACACCTTTGTCCCAGGGCTGATTGATCTGGCCATCAGGAAGAACAGTTTGATCGGTGGAGATGACTTCAAGAGTGGTCAGACCAAGATGAAATCTGTGTTGGTGGATTTCCTTGTAGGAGCTGGTATCAAGCCAACATCAATAGTGAGTTACAACCATTTAGGAAACAATGATGGCATGAATCTGTCAGCCCCACAAACCTTCCGCTCTAAGGAAATCTCCAAGAGCAACGTTGTTGACGACATGGTCAACAGCAATGCCATCCTCTTTGAGCCTGGTGAACATCCAGACCATGTTGTTGTTATTAAGTATGTGCCCTACGTGGCGGACAGCAAGAGGGCCATGGATGAGTACATCTCAGAGATATTCATGGGTGGAAAGAACACCATCGTGATGCACAACACGTGTGAGGATTCACTGTTAGCAGCTCCTATCATCTTGGACTTGGTCCTCCTTGCAGAGCTGAGCACTAGAATCCAGTTCAAGGCTGAAAATGAGAGCAAGTTCCACTCATTCCACCCTGTTGCTACCATCCTCAGTTACTTGACCAAGGCTCCTCTTGTTCCACCAGGCACACCAGTGGTGAATGCATTGTCAAAGCAGAGAGCTATGCTGGAAAACATCATGAGAGCTTGTGTTGGATTGGCTCCTGAGAACAACATGATCATGGAGTACAAGTGA 1533 0.4586 MFIESFKVESPNVKYTETEIQSVYNYETTELVHENKNNAYQWVVKPKTVKYEFKTKTNVPKLGVMLVGWGGNNGSTLTGGVIANKEGISWATKDKIQQSNYFGSLTQASAIRVGSFQGEEIYAPFKSLLPMVNPDDIVFGGWDISNLNLADAMARARVFDIDLQKQLRPYMESMVPLPGIYNPDFIAANQGERANNVLKGTKKEQVQQIIKDIKEFKEANKVDEIVVLWTANTERYSNVVVGLNDTEENLLASLDRDEAEISPSTLYAIACVMENIPFINGSPQNTFVPGLIDLAIRKNSLIGGDDFKSGQTKMKSVLVDFLVGAGIKPTSIVSYNHLGNNDGMNLSAPQTFRSKEISKSNVVDDMVNSNAILFEPGEHPDHVVVIKYVPYVADSKRAMDEYISEIFMGGKNTIVMHNTCEDSLLAAPIILDLVLLAELSTRIQFKAENESKFHSFHPVATILSYLTKAPLVPPGTPVVNALSKQRAMLENIMRACVGLAPENNMIMEYK* 511
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja4g0701 510 Pfam Myo-inositol-1-phosphate synthase 62 494 IPR002587 GO:0004512|GO:0006021|GO:0008654
Lja4g0701 510 Pfam Myo-inositol-1-phosphate synthase 310 423 IPR013021 -
Lja4g0701 510 Gene3D - 1 355 - -
Lja4g0701 510 Gene3D - 382 510 - -
Lja4g0701 510 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 4 510 IPR036291 -
Lja4g0701 510 PANTHER INOSITOL-3-PHOSPHATE SYNTHASE 1 510 - -
Lja4g0701 510 PANTHER MYO-INOSITOL-1 PHOSPHATE SYNTHASE 1 510 IPR002587 GO:0004512|GO:0006021|GO:0008654
Lja4g0701 510 SUPERFAMILY Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain 309 422 - -
Lja4g0701 510 PIRSF Myoinositol-ppht_synth 50 510 IPR002587 GO:0004512|GO:0006021|GO:0008654
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja4g0701 Lja-Chr4 5796557 5800526 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja4g0701 K01858 - gmx:100800820 973.385
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja4g0701 4 5796557 5800526 Lja4g0701 4 5796557 5800526 ECH
Lja4g0701 4 5796557 5800526 Lja6g0293 6 7302800 7306651 PCT