Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja4g0606 ATGAGTGCTTTGAATAGAAGCATTTCCTTCAACAGGGCTGCATCTTTCAATCGGAAGACTTTAAGCGTTGGAAGTCCTAGAGTTAATGTTAGCCATAACCGATTCGGATGTGTTTCTCTCAGGCTTCAGGTTCTTGTGATTATTGGTTCTGTGATTTCCTTCTTTGTAGCGGTTGGTGGTGGCTACATGTATTTGCTTCCTAGTCTCAGGCTAGCGTTTTTTCATAACCAAGCTCTCATTTCAGATAACAACAATGGATCAGTGAGGAACTGTGATGTGTTTGATGGAAGCTGGGTCCAGGTTCCTGATTCCCCTTTGTATAATGCTACAGAGTGTCCTTTTGTGGAACAAGGATTTGATTGTTTAGAGAATGGGAGGGATGACATGGATTATCTTACATGGAGGTGGAAGCCTAAAGGTTGTGAAATTCCAAGGTTTGATGTGCGTGGAGTTTTGGAAATGCTGAGAAGCAAAAGGGTTGTTTTTGTTGGTGATTCAATGAGTAGAACTCAGTGGGAGTCTCTGATTTGTATGCTGATGGCTGGGGTGGAGGATAAGGAGAGTGTTTATGAAGTGAATGGGAATAGGATAACAAAGAGGATTAGATTCTTAGGTGTCAGGTTCAGTGCCTTCAATTTCACCATTGAGTTTTTTCGCTCTGTTTTCCTGGTGCAGCAGGGGAAGGTGCCTTGGCATGCACCAAAGAGGGTGAAATCAACACTTTTGTTGGACAAGTTAGATGATATAAGTGACCAGTGGATTAATTCTGATATTCTTATATTCAACACTGGACATTGGTGGGTGCCATCTAAGCTTTTTGATCTAGGATGCTTTTTCAAGGTTGGAAACTCTCTGAAGCTTGGGATGTCTATTCCTGATGCCTTTAAAATTGCACTTGAAACTTGGACGTCATGGGTTGAGAGAAAGATTGATAAAAATAGAACTCGCGTCTATTTTAGAACTTTTGAGCCATCTCACTGGAGTGATTCTACCCGTAGGACTTGCAATGTGACCCAGTACCCGTCATTAGAAACTGATGGAAGGGATCAAAGCTTGTTTTCAGACATTGCTTTGGAAGTTGTGAAGAATGTTACCAGTCCTATAAATGTTCTCCATGTTACTTCTATGTCGGCTTTCCGGAGTGATGCACATGTTGGTAACTGGAGTGACAATCCAACTATTCAGGATTGTAGCCACTGGTGTCTACCTGGAGTACCTGATATGTGGAATGAAATCATCCTGTCCCAACTTTTTACTGAATATGAAATCCCTTTTCAGCAAATGGAATCACATGATTAG 1299 0.4157 MSALNRSISFNRAASFNRKTLSVGSPRVNVSHNRFGCVSLRLQVLVIIGSVISFFVAVGGGYMYLLPSLRLAFFHNQALISDNNNGSVRNCDVFDGSWVQVPDSPLYNATECPFVEQGFDCLENGRDDMDYLTWRWKPKGCEIPRFDVRGVLEMLRSKRVVFVGDSMSRTQWESLICMLMAGVEDKESVYEVNGNRITKRIRFLGVRFSAFNFTIEFFRSVFLVQQGKVPWHAPKRVKSTLLLDKLDDISDQWINSDILIFNTGHWWVPSKLFDLGCFFKVGNSLKLGMSIPDAFKIALETWTSWVERKIDKNRTRVYFRTFEPSHWSDSTRRTCNVTQYPSLETDGRDQSLFSDIALEVVKNVTSPINVLHVTSMSAFRSDAHVGNWSDNPTIQDCSHWCLPGVPDMWNEIILSQLFTEYEIPFQQMESHD* 433
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja4g0606 432 Pfam PMR5 N terminal Domain 90 142 IPR025846 -
Lja4g0606 432 Pfam GDSL/SGNH-like Acyl-Esterase family found in Pmr5 and Cas1p 143 415 IPR026057 GO:0016740
Lja4g0606 432 PANTHER PROTEIN TRICHOME BIREFRINGENCE-LIKE 9-RELATED 33 419 IPR029962 GO:0016413
Lja4g0606 432 PANTHER PROTEIN TRICHOME BEREFRINGENCE-LIKE 7 33 419 IPR029964 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja4g0606 Lja-Chr4 4997136 5000897 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja4g0606 - - pvu:PHAVU_002G271100g 749.584
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja4g0606 4 4997136 5000897 Lja4g0606 4 4997136 5000897 ECH