Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja4g0604 ATGTCATCTATTTTCTCCTTCCGTTACATAAACAAAATCATACATCACTGTATTCAATTCTTGTTGATGGAGGTGGAACATCCCTTATTCTCAGAGAAAACAGTGTTATTAGTTGAGCCATGCATAGCTCAAAACCAGAGCAAGACAAGCAATGAGGTTGGAGTTGTAACAAAATCAAGCATATCAGAGACATCTAATGACTTTTGTTACCACCCTGAATCCTTCAAGAAGCTAGTGGAAATGGGTCTGCCCTGTAATGAATCTGTGGAGGAAAAGCTTTCATGGTTGAGGTCCCAGATCATAGGTCATGATGCAGAGTTTGACTCTCCATTTGGAAGAAGAAAACTTCTCTATGCTGATCACACTGCTTCTGGCCGTAGTCTTCACTACAATGAAAATTTCATCATCAACCATCTTCTTCCTTTCTATGGCAACACTCACACTTGTGACAGTTATGTGGGAAGCAGAACAACAAAAATGCTACATGAAGCGACTGAGTACATTAAGAAATGCTTAGGTGGTGGAGAAAAGGATGCAATCATCTTCTGTGGTTCAGGCACAACTGCAGCCATCAAGAGGCTGCAAGAAGTGTTGGGAATAGCTGTGCCATCAATCATGAGGGAGAGGCTTTTGAAGAGCCTCACCAAAGAAGAGAGATGGGTGGTTTTTGTTGGACCCCATGAACACCACTCCAATCTCCTTTCGTGGCGGCAAAGCCTTGCCGAGGTGATAGAGATTGGTCTAGATGACCAAGGGTTGCTGGATATGGAAGCTCTGAAGTTGCAACTTGAAGCCTTTAAGCATTCGAATCGACCCCTCTTGGGATCTTTCTCTGCTTGCAGCAATGTCACTGGAATCTACTCAGATACAAGAGCTATTGCTAGGCTTCTTCACCAGTACAAAGGATTTGCATGCTTTGATTTTGCGGCAAGTGGTCCATATGTGGAGATTGACATGAGGTCAGGGCAGAGAGATGGCTATGATGCTGTGTTCCTGAGTACACATAAGTTTCTTGGTGGTCCTGACTCTCCTGGAGTGCTCCTCATGAACAAGGCCTTATATCAGTTAAGATCTTCACCACCATCCACGTGTGGCGGTGGAACTGTCACTTATGTCAACAGCTTCAATGAAAAGGATACACTATACTTGGAGAACATTGAGGATAGGGAAAATGGGGGCACGCCTCCAATAATCCAAACAGTGAGAGCAGCTTTGGCATTTTGGGTGAAAGAGTACATAGGCTATGAAGAGATTGAAAAAAGGGAACAACATTACATTAACAAGGCACTTCAGAGGCTTGTCACCAACCCCAACATTAAGGTTCTGGGAAACTTAAAAGCCAAGAGACAAGCTATATTGGCATTCCTCATCTACTCTACCACCAATGAGTGTGATGGAGATAGCCATGAACTTAATTTGTGGCAAGAAATGGGGAACCAAAGAGGCAAGCCACTTCATGGTCCTTTTGTTGCAGCACTACTCAATGACCTCTTTGGCATCCAAGCTAGAGGTGGTTGTGCTTGTGCTGGACCTTATGGCCATGATTTGCTCAACATCAACAAGTCTCAATCACTTGCTATAAGATCTTCAGTTCAAGAGGGCTATATTGGAGTAAAACCTGGATGGACCCGAGTTAGTTTTCCATATTATATGAGTGAAGAGGATTTTGAGTACATTTTGAGTTGCATAGAGTTTTTGGCTTTATATGGCCAAAGGTTCTTTCCTCTTTACAGCTTCAATTTGAGAAATGGTAGCTGGAGGATGAAGACAGAGGAATTTGAGGCATTAACCAAGGAGGGTCAACATTTGTTAGGAACAACTCTAGAGAAAGTGAACAATGATGTGCAAGAAGGAAGAGGGCATATAAGGAATCAATCTTACTTTGATGCAGCCAAATGTGTTGCTAGTAGCCTCCCCAAGTTCCCTCCTCAGGGAATACTCCAAGAAGATGTGGATCCCAATGTCCTCTGCTTCAGAGTTTGA 1983 0.4322 MSSIFSFRYINKIIHHCIQFLLMEVEHPLFSEKTVLLVEPCIAQNQSKTSNEVGVVTKSSISETSNDFCYHPESFKKLVEMGLPCNESVEEKLSWLRSQIIGHDAEFDSPFGRRKLLYADHTASGRSLHYNENFIINHLLPFYGNTHTCDSYVGSRTTKMLHEATEYIKKCLGGGEKDAIIFCGSGTTAAIKRLQEVLGIAVPSIMRERLLKSLTKEERWVVFVGPHEHHSNLLSWRQSLAEVIEIGLDDQGLLDMEALKLQLEAFKHSNRPLLGSFSACSNVTGIYSDTRAIARLLHQYKGFACFDFAASGPYVEIDMRSGQRDGYDAVFLSTHKFLGGPDSPGVLLMNKALYQLRSSPPSTCGGGTVTYVNSFNEKDTLYLENIEDRENGGTPPIIQTVRAALAFWVKEYIGYEEIEKREQHYINKALQRLVTNPNIKVLGNLKAKRQAILAFLIYSTTNECDGDSHELNLWQEMGNQRGKPLHGPFVAALLNDLFGIQARGGCACAGPYGHDLLNINKSQSLAIRSSVQEGYIGVKPGWTRVSFPYYMSEEDFEYILSCIEFLALYGQRFFPLYSFNLRNGSWRMKTEEFEALTKEGQHLLGTTLEKVNNDVQEGRGHIRNQSYFDAAKCVASSLPKFPPQGILQEDVDPNVLCFRV* 661
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja4g0604 660 SUPERFAMILY PLP-dependent transferases 109 564 IPR015424 -
Lja4g0604 660 Gene3D Aspartate Aminotransferase, domain 1 391 569 IPR015422 GO:0003824
Lja4g0604 660 Gene3D - 135 372 IPR015421 GO:0003824
Lja4g0604 660 Pfam Aminotransferase class-V 139 557 IPR000192 -
Lja4g0604 660 PANTHER CYSTEINE DESULFURASE 49 660 - -
Lja4g0604 660 PANTHER - 49 660 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja4g0604 Lja-Chr4 4987299 4990119 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja4g0604 - - lja:Lj4g3v2742940.1 1188.71
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja4g0604 4 4987299 4990119 Lja4g0604 4 4987299 4990119 ECH