Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja4g0599 ATGCAGCTTGAAGAGATTAAGGCCGCTGTTTCTGGGCTCCGGAATACTCGTGGCTTGAACTGGCCTAGTTCAATCGAGCAACACAGGCAGAAAGCCGGAGATTTGGACATGCTTGATTGGCTTAGAGCTATGTTTGGTTTCCAGAGGGACAACGTGAGGAATCAGAGAGAGCATTTGATCCTTCTCCTTGCCAACTCTCAAATAAGGCTACACCCTAAACCTGAGCCTTTCAACCAGCTTGATGATCGGGCCGTTGATTCAGTGATGAAAAACCTCTTTAAAAATTATAAAACATGGTGCAAATTTTTGGGACGAAAGCATAGTTTACGACTTCCTCAAGGTCAGCCAGAGATACAGCAGAGAAAGGTTCTCTATATGGGCTTGTATCTTCTGATCTGGGGTGAAGCAGCCAATGTTCGCTTCATGCCAGAGTGTCTGTGCTACATATTTCACAACATGGCATATGAACTACACGGTTTATTGGCTGGAAATGTCAGCATAGTTACAGGTGAGAATATCAAGCCTTCTTATGGGGGTGATGACGAGGCATTCCTGCGCAAGGTTATAACTCCCCTATACCGAGTAATTGAAAAGGAAGCCAAGAAGAGCAGAAATGGAAAGGCTCCACTCTCAGCATGGTGCAACTATGATGATCTAAATGAGTATTTCTGGTCACTTGATTGCTTTTCTCTTGGATGGCCCATGCGTGATGACGGTGATTTTTTCAAATCGACAACTGATTTGACACGGGGGAAAAAGAGTGCTCCAAGAAAAACCGGAAAAACTGGAAAATCAAATTTTGTTGAGTCGCGAACATTCTGGCACATCTTCCGCAGTTTTGATCGTCTGTGGACCTTTTTTATACTGGGTTTGCAGGTGATGTTCATTATTGCATGGGAGGGAATTTCTCTTATGGATGTCTTTCAGAAGGATGCATTATATAATCTCTCTAGTATATTCATCACAGCATCCATTCTGCGCTTACTTCAAAGTATATTGGACCCAGTCCTGAACTTTCCAGGCTATCATCGATGGGAATTCACTGATGTTCTAAGAAACATTCTTAAAGTCATTATCAGTCTTTTATGGGTTATCATTCTTCCACTGTTCTATGTACATTCCTTCAAGGGTGCACCGGAGGGTCTCAAGGAGTTGCTTTCCTTTTTTAAACAAATAAAAGGCATTCCAGCATTGTACATGCTAGCAGTTGCATTGTATATGCTTCCAAATTTACTAGCAGCTGCTCTCTTTCTTTTCCCAATGCTAAGGCGTTGGATTGAAAACTCAGACTGGCATATAATTCGATTCTTCTTATGGTGGTCTCAGCCAAGAATCTATGTTGGAAGAGGAATGCATGAAAGTCAATTTTCTCTCCTAAAGTACACTATTTTTTGGGTGTTGCTTTTGGCTTGCAAATTTTTATTCAGTTTTTTTTTCCAGATAAAACCGTTAGTTAAGCCAACCAAGGACATAATGAGCATTCAGCACGTTGATTTTGCTTGGCATGAGTTTTTCCCCAATGCTAAAAATAACTACGGTGCGGTTGTTGCACTCTGGGCTCCTGTACTTATGGTTTATTTCATGGACACTCAAATTTGGTATTCAATCTTCTCAACTTTGTACGGTGGCGTTGTTGGAGCCTTTGATCGTCTAGGAGAGATACGAACTATGAGCATGCTAAGATCGCGATTTCAGTCATTGCCCGGTGCATTCAACACATACTTGGTTCCTTCAAATAAGCAAAAAGGGAGATTCTCTTTCTCAAAGCAATTTGCCGAGGTTTCTGCAAGCAGAAGGAGTGAAGCTGCCAAATTTGCCCAATTATGGAATGAAATTATTTGCAGTTTTCGTGAGGAAGATCTCATAAGTGATAGGAAAATGGATCTTTTGCTGGTTCCTTACTCATTGGGTCCTAGTCTAAAAATCATTCAGTGGCCGCCATTTTTGCTTGCAAGCAAGATTACCGTAGCACTGGATATGGCAACCCAGTTTCGGGGGAGGGACTCTGATCTTTGGAAGCGCATATGTGCAGATGAATATATGAAATGTGCTGTGATTGAATGCTATGAATCTTTTAAACAAGTTCTACATGATCTAGTAGTAGGAGAAACTGAGAAAAGGATAATTTCCATCATCATTAAAGAAGTTGAGAGCAACATGTCAAAGAATACACTTATTACAAATTTCCGAATGGGCTTTTTACCCTCCCTATGTAAGAAGTTTGAGGAGCTTGTGGAAATCTTGCGAGATGGAAATCCATCCAAACGAGGTACAGTTGTCGTCTTGCTCCAAGACATGTTAGAAGTGGTTACTGATATGATGGTGAATGAAATCAGTGAATTGGCAGAACTTAATCAAAGTAGTAAGGATACTGGACGTCAAATTTTTGCTGGTACTGAGGCAAAGCCTGCCGTGGTATTCCCTCCCGTGGTTACCGCACAATGGGAGGAGCAGATAAGACGTCTTTATCTACTCTTGACGGTGAAGGAATTAGCCAATGAGATTCCAACCAACAGTGAAGTACGTAGAAGGATTGCATTTTTTACCAATTCATTGTTCATGGACATGCCAACTGCTCCCCGAGTCCGTAAAATGCTCTCATTCAGTGTCCTCACTCCATACTACAGTGAAGAGACAGTATATTCTAAGAATGACATCGAGCTTGAGAATGAAGACGGCGTGTCAATCATATATTATCTGCAAAAGATATTCCCTGATGAATGGAATAACTTCATGGAGCGAATTGATTGTAAAAAAGATAGTGAGATATGGGAGAAAGAAGAGAATATATTACAGCTACGTCACTGGGCCTCATTAAGAGGACAAACTCTTTGCAGGACAGTTAGGGGAATGATGTACTACCGGCGGGCATTAAAGCTCCAAGCATTTCTTGATATGGCTAATGAAAAAGAGATACTTGATGGCTATAAAGCTATTACAGTTCCATCTGAGGAAGATAAAAAGAGTCAGAGATCTCTATATGCCAGTTTAGAGGCTATGGCTGATATGAAATTCACATACATTGCTACCTGTCAGAACTATGGAAATCAGAAGCGCAGCGGAGACCGCCGTGCAACAGATATCCTGAATTTGATGGTTAACAATCCCTCACTTCGTGTTGCATATATTGATGAGGTTGAAGAAAGGGAAGGTGGAAATGTACAGAAAGTGTATTATTCTGTGTTGATCAAAGCTGTGGACAATATTGACCAAGAAATATTTCGAATAAAACTTCCTGGTCCAGCGAAGTTAGGAGAAGGGAAGCCTGAAAACCAAAATCATGCCATCATTTTTACTAGAGGGGAGGCTCTTCAGGCTATTGACATGAACCAGGACAATTACTTGGAAGAAGCTTTAAAAATGCGTAACCTGCTAGAAGAATTCAATAAGGATCATGGAATGCGCCCACCTACCATATTAGGTGTTCGTGAACATATCTTTACTGGAAGTGTTTCTTCGTTGGCTTGGTTTATGTCAAATCAAGAAACTAGCTTTGTCACAATTGGTCAAAGAGTTCTTGCAAGACCGCTGAAAGTTCGATTCCACTATGGTCATCCGGATGTTTTTGATAGAATCTTCCATTTTACTCGTGGTGGAGTCAGCAAGGCTTCTCGTGGTATCAATCTGAGCGAGGATATATTTGCTGGATTCAACTCAACATTAAGACGTGGGAATATTACCCATCATGAATATATCCAAGTCGGAAAGGGTAGAGATGTTGGGCTCAATCAAATCTCTCTTTTTGAAGCAAAAGTGGCCTGTGGTAATGGAGAACAGACACTTAGCAGGGATATCTACCGACTGGGGCATCGATTTGACTTTTTCCGCATGCTATCATTTTATTTTACAACTGTGGGATTTTATGTCAGCTCAATGTTGGTGGTTCTCACTGTTTATGCTTTCCTATATGGCAAACTTTACCTGTCATTGAGTGGATTTGAGGCTGCTATAGTTAAGTTCGCTAGAAGGAAGGGAGACGATCCTTTAAAGGCAGCAATGGCTTCACAGTCCCTTGTTCAAATAGGTCTTCTGATGACTCTGCCCATGGTCATGGAAATTGGGCTAGAGAGAGGGTTCAGAACTGCAGTCGTTGACGTCATAATAATGCAGCTGCAGCTGGCACCCGTTTTCTTTACCTTTTCACTTGGGACGAAGATGCACTATTTTGGGCGCACTCTCCTGCATGGAGGGGCAAAGTACCGAGCAACAGGTCGTGGTTTTGTAGTTCGTCATGAGAAGTTTGCGGAAAACTACAGGCTGTACTCTAGGAGTCACTTCGTAAAAGGGATAGAGCTAACTATACTGCTTATATGTTACAAAATTTATGGATCAGCAACTCCTGATTCAACAGCATATACTCTTCTCTCATGTTCAATGTGGTTTTTGGTGTGTTCTTGGCTGTTCAGCCCTTTCCTTTTTAATCCATCAGGATTTGAGTGGCAGAAGATAGTTGAAGACTTTGATGATTGGACAAAATGGATAACTAGTCGAGGTGGTATTGGTGTTCCTTCAAACAAGAGCTGGGAATCATGGTGGGATGAGGAACAGGAGCATCTGCAGTACACTGGGATTTTGGGGCAGATTTGGGAGGTTGTTCTTGCCCTGCGTTTCTTTGTCTATCAGTACGGGATCGTGTATCATCTACACGTAGCCAGGGGTGACCAGAGCATCATGGTTTATGCTCTGTCCTGGATAGTCATATTAGCTGTCATGGTCATCTTGAAGGTCGTGTCCATGGGTAGAAAGACATTCAGCGCAGATTTTCAGCTGATGTTTCGTCTCCTCAAAGTGCTTCTGTTTATAGGAACCATTGTTATTCTAGTCTTGTTGTTTACTCTACTTAGTCTCACTGTCGGAGACATCTTTGCGAGCCTCCTAGCATTCATGCCAACTGGTTGGGCATTGATACAGATAGCTCAAGCGTGGAGGCCAGTGATAAAAGGCATTGGAATGTGGGGGTCTGTCAAGGCTTTATCAAGGGGGTATGAATACGTTATGGGAGTGGTTATCTTTGCGCCAATAGCGATATTAGCTTGGTTTCCATTTGTTTCAGAATTCCAAACTAGACTGCTATACAACCAAGCATTCAGCCGAGGGCTTCAAATCCAGCGCATTCTGTCTGGTGGCAAGAAGAATAAATAA 5142 0.4199 MQLEEIKAAVSGLRNTRGLNWPSSIEQHRQKAGDLDMLDWLRAMFGFQRDNVRNQREHLILLLANSQIRLHPKPEPFNQLDDRAVDSVMKNLFKNYKTWCKFLGRKHSLRLPQGQPEIQQRKVLYMGLYLLIWGEAANVRFMPECLCYIFHNMAYELHGLLAGNVSIVTGENIKPSYGGDDEAFLRKVITPLYRVIEKEAKKSRNGKAPLSAWCNYDDLNEYFWSLDCFSLGWPMRDDGDFFKSTTDLTRGKKSAPRKTGKTGKSNFVESRTFWHIFRSFDRLWTFFILGLQVMFIIAWEGISLMDVFQKDALYNLSSIFITASILRLLQSILDPVLNFPGYHRWEFTDVLRNILKVIISLLWVIILPLFYVHSFKGAPEGLKELLSFFKQIKGIPALYMLAVALYMLPNLLAAALFLFPMLRRWIENSDWHIIRFFLWWSQPRIYVGRGMHESQFSLLKYTIFWVLLLACKFLFSFFFQIKPLVKPTKDIMSIQHVDFAWHEFFPNAKNNYGAVVALWAPVLMVYFMDTQIWYSIFSTLYGGVVGAFDRLGEIRTMSMLRSRFQSLPGAFNTYLVPSNKQKGRFSFSKQFAEVSASRRSEAAKFAQLWNEIICSFREEDLISDRKMDLLLVPYSLGPSLKIIQWPPFLLASKITVALDMATQFRGRDSDLWKRICADEYMKCAVIECYESFKQVLHDLVVGETEKRIISIIIKEVESNMSKNTLITNFRMGFLPSLCKKFEELVEILRDGNPSKRGTVVVLLQDMLEVVTDMMVNEISELAELNQSSKDTGRQIFAGTEAKPAVVFPPVVTAQWEEQIRRLYLLLTVKELANEIPTNSEVRRRIAFFTNSLFMDMPTAPRVRKMLSFSVLTPYYSEETVYSKNDIELENEDGVSIIYYLQKIFPDEWNNFMERIDCKKDSEIWEKEENILQLRHWASLRGQTLCRTVRGMMYYRRALKLQAFLDMANEKEILDGYKAITVPSEEDKKSQRSLYASLEAMADMKFTYIATCQNYGNQKRSGDRRATDILNLMVNNPSLRVAYIDEVEEREGGNVQKVYYSVLIKAVDNIDQEIFRIKLPGPAKLGEGKPENQNHAIIFTRGEALQAIDMNQDNYLEEALKMRNLLEEFNKDHGMRPPTILGVREHIFTGSVSSLAWFMSNQETSFVTIGQRVLARPLKVRFHYGHPDVFDRIFHFTRGGVSKASRGINLSEDIFAGFNSTLRRGNITHHEYIQVGKGRDVGLNQISLFEAKVACGNGEQTLSRDIYRLGHRFDFFRMLSFYFTTVGFYVSSMLVVLTVYAFLYGKLYLSLSGFEAAIVKFARRKGDDPLKAAMASQSLVQIGLLMTLPMVMEIGLERGFRTAVVDVIIMQLQLAPVFFTFSLGTKMHYFGRTLLHGGAKYRATGRGFVVRHEKFAENYRLYSRSHFVKGIELTILLICYKIYGSATPDSTAYTLLSCSMWFLVCSWLFSPFLFNPSGFEWQKIVEDFDDWTKWITSRGGIGVPSNKSWESWWDEEQEHLQYTGILGQIWEVVLALRFFVYQYGIVYHLHVARGDQSIMVYALSWIVILAVMVILKVVSMGRKTFSADFQLMFRLLKVLLFIGTIVILVLLFTLLSLTVGDIFASLLAFMPTGWALIQIAQAWRPVIKGIGMWGSVKALSRGYEYVMGVVIFAPIAILAWFPFVSEFQTRLLYNQAFSRGLQIQRILSGGKKNK* 1714
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja4g0599 1713 PANTHER LYST-INTERACTING PROTEIN LIP5 DOPAMINE RESPONSIVE PROTEIN DRG-1 1 1712 - -
Lja4g0599 1713 PANTHER GLUCAN SYNTHASE-LIKE PROTEIN 1 1712 - -
Lja4g0599 1713 SMART FKS1_dom1_2 120 236 IPR026899 -
Lja4g0599 1713 Pfam 1,3-beta-glucan synthase component 926 1531 IPR003440 GO:0000148|GO:0003843|GO:0006075|GO:0016020
Lja4g0599 1713 Pfam 1,3-beta-glucan synthase component 835 921 IPR003440 GO:0000148|GO:0003843|GO:0006075|GO:0016020
Lja4g0599 1713 Pfam 1,3-beta-glucan synthase subunit FKS1, domain-1 122 233 IPR026899 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja4g0599 Lja-Chr4 4952082 4965681 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja4g0599 1 1713 Glycosyltransferase AT1G05570 59.977 0.0 2164
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja4g0599 K11000 - gmx:100779472 3112.01
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja4g0599 4 4952082 4965681 Lja4g0599 4 4952082 4965681 ECH
Lja4g0599 4 4952082 4965681 Lja1g4508 1 58674289 58689944 PCT