Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja4g0591 ATGTTCATCAGAATAGGAATCACCGGCGTCGTTGTTATTGCGGAGACGCGTCAAGGAGGAAGAAGGAGACCGAGTTTGGTTGCAGCTTCAAAGATAACGAGAGATCCACCCACAGATTTTGCTTTGATAAGACCCCCAGGACATCATGCAGTTCCACAAGGACCTATGGGCTTCTGCGTTTTTGGAAATGTGGCTATTGCAGCCCGTTATGCTCAGCGTGTTCATGGGCTAAAGCGCGTGTTTATAATTGACTTTGATGTTCACAACGGGAATGGAACAAGTGATGCTTTCTATGATGATCCAGATGTATTTTTCCTTTCATTTCATCAAGTAAGCAACAAGATTGAAGTTATCAATGCTTTCATTTCATCTATTGTGCTTCATTCTGAAATGCCATCTGTTATCTATGTTTCTCTTTTGGTTTTTCAATGTTAG 435 0.4161 MFIRIGITGVVVIAETRQGGRRRPSLVAASKITRDPPTDFALIRPPGHHAVPQGPMGFCVFGNVAIAARYAQRVHGLKRVFIIDFDVHNGNGTSDAFYDDPDVFFLSFHQVSNKIEVINAFISSIVLHSEMPSVIYVSLLVFQC* 145
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja4g0591 144 PANTHER HISTONE DEACETYLASE 14 26 110 - -
Lja4g0591 144 PRINTS Histone deacetylase superfamily signature 79 94 IPR000286 -
Lja4g0591 144 PRINTS Histone deacetylase superfamily signature 45 68 IPR000286 -
Lja4g0591 144 SUPERFAMILY Arginase/deacetylase 28 112 IPR023696 -
Lja4g0591 144 Gene3D Histone deacetylase domain 23 121 IPR037138 -
Lja4g0591 144 Pfam Histone deacetylase domain 29 112 IPR023801 -
Lja4g0591 144 PANTHER HISTONE DEACETYLASE 26 110 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja4g0591 Lja-Chr4 4905061 4906661 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja4g0591 - - lja:Lj4g3v2742710.1 177.178
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja4g0591 4 4905061 4906661 Lja4g0591 4 4905061 4906661 ECH