Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja4g0526 ATGGCAGGATCTTCCGCAGATCTTCATCCTCACCAACCAGACATAGAACTCATGAACAACAGCAGCAAGTTAAGCCCTTCTGATCACTCCAACGTCAATGTAACCAAATCCCAGAACGAACAAGAAGAAGCACACTACGTTGAGGTCACCATGGAGGTTCAAGGTGAGTCTGTTGCCTTACAAAGTATCAAAACTGTTGCAGGCAGTGACAACATGGAAGAAGAAGGAGAAGGTGAAAAACTGGGTTTGACTACTGGCAAAAAGAAGCTTGAGAAGAAAACATCCTTTGGTGCTTCAGTGATGCAGAGTGCTACAACTCGCATCAAGCAGTTGAAGCGTTTGGCATCATTTTCGAAACCGGAGCCGGAGAAACAGTTGGCAAGGACTAAATCTGCAGTGGCTCATGCTCTCACTGGACTCAAGTTTATCAGCAAAACCGATGGTGGTGCTGGGTGGGGTGAGGTTGAGAAGGAGTTTGACAAGCTCACTGCTTCCACTGATGGGTATCTTCCTCGTGCACTCTTTGCCAAATGCATAGGATTGAACAAGGAGTCTGAGGCTTATGCAGAGAAATTGTTTGATACTCTTGCTAGGCAGAGAGGTATTCAGGGAGGTTCCATTAACAAGATCCAGTTTAGGGAATTCTGGGACCGAATGTCTGACCAGAGCTTCGATTCTAGGCTCAAAACATTCTTTGACATGGTTGATAAGGATGCAGATGGTAGGATCAACGAGGAAGAAATCAAAGAGATTATATGCCTTAGTGCCACTGCCAACAAACTGTCAAACATCCAGACACAGGCAGAGGAATATGCGCGTTTGATCATGGAAGAACTAGACCCTGATGACACAGGACATATCTTGATAGGCAACCTGGAGACTCTCTTATTACATGGACCTGAGCAAACTACAAGAGGAGAAAGCAAGTACCTGAGCCAAATGCTAAGCCAAAAGCTTAAGCCTACACTTGTGGACTATCCTGTTGTGAGGTGGTTCAGAGATGCCAAGTACTTCTTGCAGGACAATTGGCAAAGAGCTTGGGTACTTATACTGTGGATTGGTGTGATGCTGGGTTTATTCGCCTTTAAATTCGTGCAATATCGGAGAAGAGCTGCCTATGAGGTTATGGGACATTGTGTGTGCATGGCAAAAGGTGCAGCTGAGACACTTAAGTTGAACATGGCTCTTATCTTGTTGCCGGCTTGCCGAAACACCATTACCTGGCTTCGGAATAGGACCAAGCTAGGTGTTGTAGTTCCTTTCGATGACAACATCAACTTCCACAAGGTGATAGCAGTGGCAATAGCAATTGGTGTTGGTATACATGTTATTTATCATCTTGCTTGTGATTTCCCTCGCCTTCTTCACGCAAGCGATGAAAAGTACAAACTCATGAAGCCTTTTTTCGGGGATAAACCATCAAATTATTGGCATTTTATCAAATCATGGGAAGGAGTAACAGGGATTCTAATGGTTGTTCTAATGGCAATAGCCTTTACACTGGCCAATCCCAGATTCAGGCGAGGCCAGGCCAAATTACCCAAACCTTTCAACAGAATCACAGGTTTCAATGCCTTTTGGTATTCACATCACCTCTTCATCATTGTCTATGCCCTGTTGGTTGTGCATGGAATCAAACTTTACTTGACTCAGGATTGGAACAAGAAAACGACCTGGATGTATCTAGCTGTTCCCATCACCATTTATCTAGTGGAAAGACTGATTAGAGCACTCAGATCTAGCACCAAGTCTGTGAGAATATTAAAGGTGGCTGTTTATCCTGGAAATGTGTTAGCACTTCATATGTCAAAGCCTAATGGTTTTACCTACAAGAGTGGACAATACATGTTTGTCAATTGTGCTGCCGTGTCTCCATTTGAATGGCATCCATTTTCCATAACTTCTGCCCCTGATGATGAATTCCTTAGCGTTCACATTAAAATACTTGGTGACTGGACTCGAAGTTTGAAAGCCAAATTCTCAGAGGCTTGCCTGCCAGCCCTCAATGGCCAGAGTGGACTTCTAAGAGCTGAATGCTCCAAAGGAGAATACAGCCCCAGTAATTTTCCTAAAGTTCTGGTTGATGGCCCGTATGGAGCACCAGCACAAGACTACAGGGAGTACGAGGTGGTTTTACTTGTAGGGCTTGGTATAGGAGCTACCCCAATGATAAGTATACTCAAGGACATGATCAGTAATTTCAAGGCAATGGAAGAAGAAGAGGAGTGGTCCACAATAGAGGAGGGATCACCACAACAAAAAAAGTTCAGTGACTTCAAGACAAGGAGGGCATACTTCTACTGGGTAACAAGAGAGCAAAATTCTTTTGACTGGTTTAAAGGGGTGATGAATGAGGTTGCTGAAGAGGATAGAAGGGGAGTGATTGAGCTGCACAGTTACTGCACCAGTGTCTATGAGGAAGGTGATGCTCGCTCTGCTCTTATTGCCATGGTGCAGTCTATACACCATGCAAAGAATGGCGTGGACATCGTCTCCGGCACACGCGTCATGTCTCACTTCGCCAAACCCAATTGGCGAACTGTCTACAAGCGCATTGCGCTTAATCATCCACAAGCAAGAGTTGGGGTATTTTACTGCGGGCCACCCACTCTCACCCAAGAGCTTCGTCAGCTAGCATTGGATTTCTCTCACAACACACCCACCAAGTTCGATTTTCATAAAGAAAATTTCTGA 2694 0.448 MAGSSADLHPHQPDIELMNNSSKLSPSDHSNVNVTKSQNEQEEAHYVEVTMEVQGESVALQSIKTVAGSDNMEEEGEGEKLGLTTGKKKLEKKTSFGASVMQSATTRIKQLKRLASFSKPEPEKQLARTKSAVAHALTGLKFISKTDGGAGWGEVEKEFDKLTASTDGYLPRALFAKCIGLNKESEAYAEKLFDTLARQRGIQGGSINKIQFREFWDRMSDQSFDSRLKTFFDMVDKDADGRINEEEIKEIICLSATANKLSNIQTQAEEYARLIMEELDPDDTGHILIGNLETLLLHGPEQTTRGESKYLSQMLSQKLKPTLVDYPVVRWFRDAKYFLQDNWQRAWVLILWIGVMLGLFAFKFVQYRRRAAYEVMGHCVCMAKGAAETLKLNMALILLPACRNTITWLRNRTKLGVVVPFDDNINFHKVIAVAIAIGVGIHVIYHLACDFPRLLHASDEKYKLMKPFFGDKPSNYWHFIKSWEGVTGILMVVLMAIAFTLANPRFRRGQAKLPKPFNRITGFNAFWYSHHLFIIVYALLVVHGIKLYLTQDWNKKTTWMYLAVPITIYLVERLIRALRSSTKSVRILKVAVYPGNVLALHMSKPNGFTYKSGQYMFVNCAAVSPFEWHPFSITSAPDDEFLSVHIKILGDWTRSLKAKFSEACLPALNGQSGLLRAECSKGEYSPSNFPKVLVDGPYGAPAQDYREYEVVLLVGLGIGATPMISILKDMISNFKAMEEEEEWSTIEEGSPQQKKFSDFKTRRAYFYWVTREQNSFDWFKGVMNEVAEEDRRGVIELHSYCTSVYEEGDARSALIAMVQSIHHAKNGVDIVSGTRVMSHFAKPNWRTVYKRIALNHPQARVGVFYCGPPTLTQELRQLALDFSHNTPTKFDFHKENF* 898
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja4g0526 897 SFLD Ferric reductase subgroup (FRE) 318 897 - -
Lja4g0526 897 SUPERFAMILY Ferredoxin reductase-like, C-terminal NADP-linked domain 706 897 IPR039261 -
Lja4g0526 897 Gene3D - 126 244 - -
Lja4g0526 897 MobiDBLite consensus disorder prediction 1 42 - -
Lja4g0526 897 MobiDBLite consensus disorder prediction 15 40 - -
Lja4g0526 897 Pfam Ferric reductase like transmembrane component 385 541 IPR013130 -
Lja4g0526 897 SUPERFAMILY EF-hand 154 298 IPR011992 -
Lja4g0526 897 ProSiteProfiles Ferredoxin reductase-type FAD binding domain profile. 580 704 IPR017927 GO:0016491
Lja4g0526 897 Gene3D - 699 897 IPR039261 -
Lja4g0526 897 Pfam Ferric reductase NAD binding domain 708 879 IPR013121 GO:0016491
Lja4g0526 897 Gene3D Translation factors 571 663 - -
Lja4g0526 897 SUPERFAMILY Riboflavin synthase domain-like 584 701 IPR017938 -
Lja4g0526 897 ProSitePatterns EF-hand calcium-binding domain. 236 248 IPR018247 -
Lja4g0526 897 CDD NOX_Duox_like_FAD_NADP 587 897 - -
Lja4g0526 897 SFLD NADPH oxidase subgroup (NOX) 31 897 - -
Lja4g0526 897 PRINTS Cytochrome B-245 heavy chain signature 713 730 IPR000778 GO:0016020|GO:0016491
Lja4g0526 897 PRINTS Cytochrome B-245 heavy chain signature 431 449 IPR000778 GO:0016020|GO:0016491
Lja4g0526 897 PRINTS Cytochrome B-245 heavy chain signature 690 703 IPR000778 GO:0016020|GO:0016491
Lja4g0526 897 PRINTS Cytochrome B-245 heavy chain signature 523 543 IPR000778 GO:0016020|GO:0016491
Lja4g0526 897 PANTHER NADPH OXIDASE 34 897 - -
Lja4g0526 897 PANTHER RESPIRATORY BURST OXIDASE-LIKE PROTEIN D 34 897 - -
Lja4g0526 897 Pfam FAD-binding domain 584 701 IPR013112 GO:0016491
Lja4g0526 897 Pfam Respiratory burst NADPH oxidase 126 226 IPR013623 GO:0004601|GO:0050664
Lja4g0526 897 ProSiteProfiles EF-hand calcium-binding domain profile. 223 258 IPR002048 GO:0005509
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja4g0526 Lja-Chr4 4308283 4314245 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja4g0526 37 897 Miscellaneous Gene Families AT5G51060 63.512 0.0 1145
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja4g0526 K13447 - gmx:100814238 1456.04
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja4g0526 4 4308283 4314245 Lja4g0526 4 4308283 4314245 ECH