Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja4g0500 ATGTCTCAGCAACCTTCTGATCAGGTCATCATGGCGGCACCACAAAATTCTGAGACACAAAATGGTCCTTCTTCTGCTGTTGTTGTTGCTGCTGCTCCTGCTCCTGCTGCTGAATCTCCTCCAGTTGAGAGGATCAAAGCCACAAGACACCCTCGTTGGACAAGGCAAGAAACACTTGTCCTCATAGAGTCCAAGAAATTGGTTGAAAATGGCGAACATGGTGGTTACCACCGATTCAGATCACCAGCATCGTCATCTGGGTTGGTTTCTCCTCATCACGGTGATCACAAATGGGATTTGGTGTCATCACTGTGTCAGCAACATGGTGTGAAGAGAGGTGCTGTGCAGTGTAGGAAGAGATGGGGGAACCTTCTCACTGATTTCAGGAAGATCAAGAAATGGGAAACGAGCATCAAGGAGGAGACGGAGTCGTTTTGGATCATGAGGAATGATCTGAGGAAGGAGAAGAAGCTTCCTGGGTTCTTTGATGCTGTGGTGTACAATGTGCTTGATGGTGGGGTTTGCACTGTTGGTGCATTTCCTCTGACTCTGGTCAAAATGAGTGAGGGAAAAACAGAGAAAACAGGGCATGGTGTTGAAGGAGTGGGGGCAGAGCAAGGTGAGGAGGAGGAAGGGGAGGAGGGAGAGGAGGAAGAGGATGAGGCTATTGTTGACATAGAGAGGCAGCAACAACCATCTTGCGAAGGGAATAGTGATCCTGGCTATCATGGAGAACCTGTCCAAGAGGGACCAAAGAGAAGGAGAATATCACCAGAAAATTCTGAAGATGACATTGTCAAAGTGATGAGGAGGAACAGCGACATACTGAAAGCCCATCTTGGAGCTCAGAACATGAATCAGCAGTTGGCTAGGGAGCAGCAGAAGCAGCAGACAGAGAGCTTAGTTGCAACGCTTGGAAAACTTGCAGATGCTCTCACCAAAATTGCTGACAAGCTGTGA 960 0.4833 MSQQPSDQVIMAAPQNSETQNGPSSAVVVAAAPAPAAESPPVERIKATRHPRWTRQETLVLIESKKLVENGEHGGYHRFRSPASSSGLVSPHHGDHKWDLVSSLCQQHGVKRGAVQCRKRWGNLLTDFRKIKKWETSIKEETESFWIMRNDLRKEKKLPGFFDAVVYNVLDGGVCTVGAFPLTLVKMSEGKTEKTGHGVEGVGAEQGEEEEGEEGEEEEDEAIVDIERQQQPSCEGNSDPGYHGEPVQEGPKRRRISPENSEDDIVKVMRRNSDILKAHLGAQNMNQQLAREQQKQQTESLVATLGKLADALTKIADKL* 320
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja4g0500 319 PANTHER TRIHELIX TRANSCRIPTION FACTOR ASR3 42 319 - -
Lja4g0500 319 MobiDBLite consensus disorder prediction 1 42 - -
Lja4g0500 319 MobiDBLite consensus disorder prediction 1 26 - -
Lja4g0500 319 PANTHER MYB/SANT-LIKE DNA-BINDING DOMAIN PROTEIN 42 319 - -
Lja4g0500 319 SUPERFAMILY Homeodomain-like 92 133 IPR009057 -
Lja4g0500 319 Gene3D - 53 130 - -
Lja4g0500 319 MobiDBLite consensus disorder prediction 191 263 - -
Lja4g0500 319 Pfam Myb/SANT-like DNA-binding domain 51 147 IPR044822 -
Lja4g0500 319 MobiDBLite consensus disorder prediction 246 263 - -
Lja4g0500 319 MobiDBLite consensus disorder prediction 205 224 - -
Lja4g0500 319 ProSiteProfiles Myb-like domain profile. 52 125 IPR001005 -
Lja4g0500 319 MobiDBLite consensus disorder prediction 72 91 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja4g0500 Lja-Chr4 4086729 4089837 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja4g0500 - - gmx:100798417 326.635
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja4g0500 4 4086729 4089837 Lja4g0500 4 4086729 4089837 ECH