Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja4g0498 ATGGTGAAGGAGAATCCAGTGTCCGCTATGGAAATCGATGATCAGAAATCGACGAATTCAGATCAGATCGTTCCCAAGTTCTCCATTCACGTACTGCAGCTCTTGAAATCTGCGCAAATGCAGCATGGTTTGCGTCATGGAGATTACACTCGCTATCGGAGGTATTGCACGGCTCGTTTGAGGAGGTTATATAAGTCGTTGAAGTTTACCCATGGTCGCGGCAAATATTCAAAAAGAACCATATCTGAGTCCAATGTCACTGAAGTAAGGTTTCTTCATGTGATTCTCTATTCCGCAGAGAGAGCATGGAGTCATGCCATGGAGAAAAGGCAGCTTCCAAATGGGCCAAATGCACGCCAACGTATCTATTTGATTGGCAGGTTGCGGAAGGCAGTAAAATGGGCTACTTTGTTTTCACAATTGTGTGCAGTCAAGTCAGATTCTAGAACATCTTTGGAAGCTGAGGCTTATGAATCCTATATGAAGGGGAGTTTGTTGTTTGAACAAGATCAGAATTGGGACGTGGCGCTAAAGCACTTCAAAAGTGCTAGGGCCGTATATGAGGAATTAGGCAAATATGGAGATCTGGATAACCAAGTGATGTGTCGTGAGCGAGTTGAGGAACTCGAACCTAGTATCAGATACTGCCTTCACAAAATTGGCGAGTCAAATCTACAAGCCTCTGAACTGTTAAATATTGGTGATATGGAAGGGCCTGCATTAGACCTTTTTAAAGCTAAATTAGAGGCTGTCATGGCTGAGGCAAGATCTCAACAAGCTGCTTCCTTGACTGAATTCCATTGGCTTGGCCATAGATTTCCAATTTCAAATGCCAAAACAAGGGTTGCCATTTTGAAAGCTCAGGAGCTGGAGAAAGATATACATGGTCCCTCGGCAGATTCTATTCCAGCAGACAAAAGATTGGTTATTTTTGACAAAATCTTTTCCGCATATCATGATGCTAGAGGCTTTATTCGGGCTGATTTGGCTACTACAGGAAGTGCTGAAAGTGTAAAAGATGATCTGAATGGCCTTGATAAGGCTGTCAGTGCTGTCTTAGGAGAAAGAACCATTGAGCGCAACCTCTTGTTGGTTAAGGTAGCGAAGAGTAAACTTGCAAGGCGTAGTGATGATAAAAATGAAAAAGTCACCAAACCTGAAGAGCTTGTTCGCTTATATGATCTCTTGCTACAGAATACAGCTGATCTATCAGATTTAGTCAGTTCTGGAAGGGACAGAAACTCAGAAGAAGTTAACTTTGCTGAAGTGTGTTCGTGCAAAAGTTTGGCTTTTCGAGCTGAAAGGTGCTTTTACGTTGCGAAGTCATATGGTGTTGCTGGAAAGAGGGCTGAAGCATATGCTTTGTATTGTCGTGCTCGAACACTGGCAGAAGATGCCCTAAGAAAGTTTCAAATGTTAGATGGTGATAATAAGACTATGGTGAAAGAGCTAGAGGTCTTGTGCAATGAATGCCGCTCTAACAGTTGTATAGAGCACGCGTTGGGGATCATGGAGGAGAAGAAGGCTCAAGAGAATCTCTCCGAAGGGATCTCTAATATATCATTAACTGGAGCTGAGCGGTTGGAGAAATTCCTTCTTGAGAAACTTGATATCTTTGAGTCTGCTGTGGGTGATTCAAATGTGAAACGTGCTCCCCGTATTGCAGCTTTCCCTCCAGCTTTCCAATCAATCTCCCGCAATCCTATTGTGCTGGATCTGGCCTATAACATGATTGAATTCCCATCTATCGAGAGTCGGATGAAGAAGGATAGAAAAGCTAAGGGTGGCTTTATCAGTAGAATATTTGGATGA 1812 0.4305 MVKENPVSAMEIDDQKSTNSDQIVPKFSIHVLQLLKSAQMQHGLRHGDYTRYRRYCTARLRRLYKSLKFTHGRGKYSKRTISESNVTEVRFLHVILYSAERAWSHAMEKRQLPNGPNARQRIYLIGRLRKAVKWATLFSQLCAVKSDSRTSLEAEAYESYMKGSLLFEQDQNWDVALKHFKSARAVYEELGKYGDLDNQVMCRERVEELEPSIRYCLHKIGESNLQASELLNIGDMEGPALDLFKAKLEAVMAEARSQQAASLTEFHWLGHRFPISNAKTRVAILKAQELEKDIHGPSADSIPADKRLVIFDKIFSAYHDARGFIRADLATTGSAESVKDDLNGLDKAVSAVLGERTIERNLLLVKVAKSKLARRSDDKNEKVTKPEELVRLYDLLLQNTADLSDLVSSGRDRNSEEVNFAEVCSCKSLAFRAERCFYVAKSYGVAGKRAEAYALYCRARTLAEDALRKFQMLDGDNKTMVKELEVLCNECRSNSCIEHALGIMEEKKAQENLSEGISNISLTGAERLEKFLLEKLDIFESAVGDSNVKRAPRIAAFPPAFQSISRNPIVLDLAYNMIEFPSIESRMKKDRKAKGGFISRIFG* 604
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja4g0498 603 CDD SRP68-RBD 31 218 IPR034652 GO:0003723
Lja4g0498 603 Pfam RNA-binding signal recognition particle 68 44 578 IPR026258 GO:0005047|GO:0005786|GO:0006614|GO:0008312|GO:0030942
Lja4g0498 603 Gene3D - 26 223 IPR038253 GO:0003723
Lja4g0498 603 PIRSF SRP68 27 596 IPR026258 GO:0005047|GO:0005786|GO:0006614|GO:0008312|GO:0030942
Lja4g0498 603 PANTHER SIGNAL RECOGNITION PARTICLE 68 KDA PROTEIN 15 601 IPR026258 GO:0005047|GO:0005786|GO:0006614|GO:0008312|GO:0030942
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja4g0498 K03107 - gmx:100816486 1060.44
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja4g0498 4 4076368 4083208 Lja4g0498 4 4076368 4083208 ECH