Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja4g0486 ATGATGGATCAGACCAGAACCGACACTCCGGCGCCCACGCGCCAGTGGAGCGGCGTTTCCAGCAGCACCGGCTCATCGTCTCCGGTCATGTCACCGGCTCACCCTCATTCGCGGCTCGGTTCCATCAAGCACCGAGACTTAGCCACCAAAGCAGCCGCGCAGCAGCGTCTTGCTCAGGCCATGGCGTCTCACTACGACGATGATGATGACGACGATGGTCTCCGGTTCGCTGCTCCGGCCCCTCTCTCCCCCTCCAGTGGTTACACCAGGAACGGTGGTATTACCGCCTTTCCTCCGATTTCAAATCGGTCTCCGTCTCATAAGTTAGGTCGGAACATTGTAGAGCATAGTCTTTCAGCACGCTCACTATCAGCTGGAAGATCAGCGGCGTTTGTTCGTTCAACAACAGCAACAATGGTGCCTCCCAGTAAATTGACTATTCCAATGGATCTTCCGATCAATAGAAGTAGAGACAAGAGGTTTCTTTCATATGTCAGTCAACTTAACTCAAAAGACACAGGAGATCAGCGTGAAGCTTTTGCACTCCAGGATGAACTTGATATGCTAAAAGAAGAGAACAATATTATGATATACAAGCTAAGACAGGAAGAGGAAAGACTTGAAGAAGCAGAAGCTAGAGCTAGGGAACTTGAAAAACAGGTTGCTTCTCTTGGAGAAGGCATATCCCTGGAAGCCAAATTGCTGAGCAGGAAGGAAGCTGTTTTGCGTCAAAGAGAGGCTGCTCTCAAGTCTGCAAAACAAACACATGATGGGGAAGATGAGGAAATGACTGCCCTTCGTGAGGAAATTCAGAACTTAAAAGATGACACTGCAGCAGCTGTAGATCAACAGAAGGAAGCTGAAGCTGAAGCAAAGGCTCTTAGCATAATGACACAGAGAATGGTTTTGACCCAAGAAGAAATGGAGGAAGTTGTTCTGAAAAGATGCTGGCTTGCTCGTTACTGGGGTCTCGCTGTAAAATATGGTATATGTGCAGATATAGCACCATCACAACATGAACATTGGTCATCTCTTGCTCCTCTTCCTTTTGAAGTTGTTACTTCTGCTGGACAAAAGGCTAAGGAAGAATCTTGGAACAAAAGTGACGATGATCCAGATGGTAACAAACCTATTCGTGATTTGAATGATCTCACTGGGGAAGGAAACATTGAAAGCATGCTTTCTATTGAGATGGGTTTGAGAGAGCTTGCTTCACTAAAGGTTGAGGATGCTGTTGTGCTTGCATTAGCCCAGCATAGACACCCAAATTTAGTTCGGCAGTCCATTTTAGATTCCACAGCACCTGGTGATCCCAACTTTGTTGAAGCATTTGAGTTAAGTGATGAAGAAGCAGAAGATGTTCTTTTCAAACAGGCTTGGTTACTTTATTTCTGGAGAAGAGCTTTATTCAATGGTGTAGAAGATGTTGCAGAAGAGCGTCTTCAGTTTTGGATTAGCCGCAGTGGGCAGACACCAACTTCTCGTGATGCCGTTGATGTTGAGCAAGGTTTGTTGGAATTGAAGAAGCTGGGTATAGAACAGAAACTTTGGGAAGCATCTCGGAAGGAAACTGATCAACCTCCAAGCTTACCAGCTGATAATCATAAGCTTTCCACCGAATCGGAAGCTTCATCCTGA 1638 0.4628 MMDQTRTDTPAPTRQWSGVSSSTGSSSPVMSPAHPHSRLGSIKHRDLATKAAAQQRLAQAMASHYDDDDDDDGLRFAAPAPLSPSSGYTRNGGITAFPPISNRSPSHKLGRNIVEHSLSARSLSAGRSAAFVRSTTATMVPPSKLTIPMDLPINRSRDKRFLSYVSQLNSKDTGDQREAFALQDELDMLKEENNIMIYKLRQEEERLEEAEARARELEKQVASLGEGISLEAKLLSRKEAVLRQREAALKSAKQTHDGEDEEMTALREEIQNLKDDTAAAVDQQKEAEAEAKALSIMTQRMVLTQEEMEEVVLKRCWLARYWGLAVKYGICADIAPSQHEHWSSLAPLPFEVVTSAGQKAKEESWNKSDDDPDGNKPIRDLNDLTGEGNIESMLSIEMGLRELASLKVEDAVVLALAQHRHPNLVRQSILDSTAPGDPNFVEAFELSDEEAEDVLFKQAWLLYFWRRALFNGVEDVAEERLQFWISRSGQTPTSRDAVDVEQGLLELKKLGIEQKLWEASRKETDQPPSLPADNHKLSTESEASS* 546
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja4g0486 545 MobiDBLite consensus disorder prediction 531 545 - -
Lja4g0486 545 MobiDBLite consensus disorder prediction 518 545 - -
Lja4g0486 545 PANTHER MYOSIN 2 526 - -
Lja4g0486 545 Coils Coil 186 227 - -
Lja4g0486 545 MobiDBLite consensus disorder prediction 362 380 - -
Lja4g0486 545 MobiDBLite consensus disorder prediction 1 32 - -
Lja4g0486 545 MobiDBLite consensus disorder prediction 357 382 - -
Lja4g0486 545 MobiDBLite consensus disorder prediction 1 91 - -
Lja4g0486 545 Coils Coil 249 290 - -
Lja4g0486 545 PANTHER FAS-BINDING FACTOR-LIKE PROTEIN 2 526 IPR040321 GO:0000911
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja4g0486 Lja-Chr4 3961572 3969760 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja4g0486 2 521 EF-hand Containing Proteins AT5G13260 53.394 7.44e-170 490
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja4g0486 - - aprc:113865708 688.723
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja4g0486 4 3961572 3969760 Lja4g0486 4 3961572 3969760 ECH