Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja4g0469 ATGGATGAACCTCGTGTGAAGGAGGAAGTGTTGGACATTCCAAATGTCGAAGATCGGAGGCAGAGAAACAACAACGGTGGTGGCGTGCCGCTGTTTCCTCCTGACTCGGTCATCGAACTCAGCAGCAGTAGCGGAAGCGATTCCGATTCTGATTCCGACGGCGATTTGGATAGCATCATCGCTAGCGCGGTCGAGCGTGGTGCTTCGGGTGGGGGTCCTGCTAAGAAGCGGAAGGTGAGCGACTCGGGGGTGGTTTTGCCGGTTGGATTCCTCAGCCCTCTCCCTCCTCCTCCTCCTCCTCCGCCGCCGCAGTTGCAGCCTGAGGCGGTTTTGTCGCTTCCGGCGCCGGCGTGGGCTTCTGCTTCGGCAGCGCGTGCCCGTGATGGGAGCCGGAGTGGTAGCACCAAACAGTTCTGGAAAGCTGGGGACTATGACGGTGCTCCTGGGACTAGCAGAGTCGTTGAAACTTCAACAGTTGGTATGGATCATGTCAGAGTTCACCCTAAGTTTCTACACTCTAATGCCACAAGTCATAAATGGGCACTTGGAGCTTTTGCTGAGCTCTTGGACAATTCATTGGATGAGGTTTGTAATGGGGCTACATATGTTAATGTAGATATGGTTTTAAGTAAGAAAGATGGCTCCCGGATGTTGCTGATTGAAGATAATGGTGGTGGGATGGATCCTGATAAAATGCGCCAATGCATGTCACTTGGGTATTCTGCGAAAAGCAAAATGGCAAATACGATTGGACAATATGGAAATGGCTTTAAAACAAGTACCATGAGGCTTGGGGCTGATGTAATTGTATTCTCCCGTTGTCACGGGAAAGATGGGAAAAGCCCGACACAAAGCATAGGCTTGCTTTCTTACACATTTTTGAGGAGTACAGGGAAGGAAGACATTGTAGTGCCCATGCTGGACTACGAAAGAGAAGGACGGGAATGGAAGATGATGTTACGAGCTTCTCCGGATGATTGGAATAAAAATGTGGAAACAATAGTTCAATGGTCACCATTTTCTGATGAGACTGATCTTCTTCGTCAGTTCAACCTGATGAAAGATCAAGGTACTCGAGTAATTATATACAATCTTTGGGAGGATGACCAAGGTCAGCTGGAACTTGATTTTGATGTAGATCCACATGATATTCAAATAAGAGGGGTAAATCGAGATGAGAAGAGTATACAGATGGCTAAGGAGTTTCCCAACTCTAGACACTTCCTAACTTATCGACATTCACTGAGGAGTTATGCCTCAATTTTATATCTGAGGTTTCCTCCAGGCTTTCGAATTATTCTTCGGGGGAAAGATGTTCTGCATCACAATATAGTGAATGATATGATGATGTCTCAGGAGGTGACGTATAGGCCTCAAGCGGGAGTTGGTGATGGGATTTCAAAGGATACAAATATGGTTGCTGTTGTTACAATCGGATTTGTCAAAGATGCAGTTCATCACATTGATGTTCAAGGGTTTAATGTATATCATAAGAATCGACTCATTAAGCCATTCTGGAGGATCTGGAATCCGGCTGGAAGTGGTGGACGAGGGGTCATAGGTGTTTTGGAAGCCAACTTTGTTGAACCTGCTCATGATAAGCAAGGCTTTGAGCGCACATTAGTTTTATCAAGACTTGAGTCACGACTGATTCAAATGCAAAAGAATTATTGGAGCTCTCACTCCCATAAAATTGGTTATTGCAATCGAACTAAAAAACAAACCAGCAATTCTGCTGATAAAGAGAGATCTTCTGACCATGTTCCTGAATCATCTCAACCAAAAAGGAACTCTTCTGCCACAAATGGCAAGACAACACCATTGGCATCAGACAAAACATATTCACACTCAAATCAGAAACGGATGCGAAAAGAACCAGAAAGATATGCTGAATACACAAACAGTCGCTTGTCACCTGAACAATCATCATCTGCTGATGAAGGCAGTGATCAAATTAATGGTGTCTCGTCAAATAAAGCTAAGGGAGGAAGTCAAAAGACATCTATAGGTGGAAAGTCAGTTGAAAATGCGAGTGGATGTTTTCCAGATACTACATCAATGGGAAAAGGCTTGCGATCTACACGAGGATCTAACCTAAAGGGAAAAGATGTTGAGTATGGTGATGAACCACTATCTGCCTCTGATATGCTGACTGTAGAGAAGTTGAAAAAAGATAATCTTGAGTTAAGGAAAAGATCAGAGAGGAAGGAGGAAGAAATTTTAGGGGAAGTATTGCAGGCTTTGCAGCATGAGAAAGACAAGTGCAAATCTCTCGAAACTCAGCTCCAGGATGCGCAGCAAAAGATTGAAGAATTGAACAAGGAACAAGAAACTCTTATTGATGTATTCTCTGAAGAGAGGGATAGACGTGATTCTGAAGAAAAAAATTTGAGAAAGAGACTTCAGGATGCATCAAATACCATCCAAGAGCTGCTTGACAAGGTACGAATGCTCGAGAGGAAGTCTTCAAGCGGCAAAAAATGA 2484 0.4436 MDEPRVKEEVLDIPNVEDRRQRNNNGGGVPLFPPDSVIELSSSSGSDSDSDSDGDLDSIIASAVERGASGGGPAKKRKVSDSGVVLPVGFLSPLPPPPPPPPPQLQPEAVLSLPAPAWASASAARARDGSRSGSTKQFWKAGDYDGAPGTSRVVETSTVGMDHVRVHPKFLHSNATSHKWALGAFAELLDNSLDEVCNGATYVNVDMVLSKKDGSRMLLIEDNGGGMDPDKMRQCMSLGYSAKSKMANTIGQYGNGFKTSTMRLGADVIVFSRCHGKDGKSPTQSIGLLSYTFLRSTGKEDIVVPMLDYEREGREWKMMLRASPDDWNKNVETIVQWSPFSDETDLLRQFNLMKDQGTRVIIYNLWEDDQGQLELDFDVDPHDIQIRGVNRDEKSIQMAKEFPNSRHFLTYRHSLRSYASILYLRFPPGFRIILRGKDVLHHNIVNDMMMSQEVTYRPQAGVGDGISKDTNMVAVVTIGFVKDAVHHIDVQGFNVYHKNRLIKPFWRIWNPAGSGGRGVIGVLEANFVEPAHDKQGFERTLVLSRLESRLIQMQKNYWSSHSHKIGYCNRTKKQTSNSADKERSSDHVPESSQPKRNSSATNGKTTPLASDKTYSHSNQKRMRKEPERYAEYTNSRLSPEQSSSADEGSDQINGVSSNKAKGGSQKTSIGGKSVENASGCFPDTTSMGKGLRSTRGSNLKGKDVEYGDEPLSASDMLTVEKLKKDNLELRKRSERKEEEILGEVLQALQHEKDKCKSLETQLQDAQQKIEELNKEQETLIDVFSEERDRRDSEEKNLRKRLQDASNTIQELLDKVRMLERKSSSGKK* 828
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja4g0469 827 PANTHER PROTEIN MICRORCHIDIA 7 5 814 - -
Lja4g0469 827 SUPERFAMILY ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 183 378 IPR036890 -
Lja4g0469 827 MobiDBLite consensus disorder prediction 1 80 - -
Lja4g0469 827 Gene3D - 168 369 IPR036890 -
Lja4g0469 827 MobiDBLite consensus disorder prediction 122 142 - -
Lja4g0469 827 MobiDBLite consensus disorder prediction 634 693 - -
Lja4g0469 827 MobiDBLite consensus disorder prediction 1 19 - -
Lja4g0469 827 MobiDBLite consensus disorder prediction 575 590 - -
Lja4g0469 827 MobiDBLite consensus disorder prediction 568 709 - -
Lja4g0469 827 Coils Coil 794 821 - -
Lja4g0469 827 Coils Coil 719 739 - -
Lja4g0469 827 MobiDBLite consensus disorder prediction 591 615 - -
Lja4g0469 827 MobiDBLite consensus disorder prediction 616 631 - -
Lja4g0469 827 PANTHER ZINC FINGER CW-TYPE COILED-COIL DOMAIN PROTEIN 3. 5 814 IPR045261 GO:0016887
Lja4g0469 827 Coils Coil 748 782 - -
Lja4g0469 827 Pfam Morc6 ribosomal protein S5 domain 2-like 413 558 IPR041006 -
Lja4g0469 827 Pfam Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 183 279 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja4g0469 Lja-Chr4 3827543 3840249 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja4g0469 - - lja:Lj4g3v2883320.1 1229.54
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja4g0469 4 3827543 3840249 Lja4g0469 4 3827543 3840249 ECH