Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja4g0467 ATGCACATCCGCCGTCTCCAGCTCGACTTCGACTCCGACGAAGAGCAAGCCGATGTTCCGCCTCAGCCACACAAACCCACTCATCAAGCTCCGAACCCTACCAATTCCCCCCCGGAACCAGTTATAATCTCCGATGAGGACTTCGTCGACGTCTCCGATGACCCATCGCCGCCATCCCCACCACCTGCGCCGGTTCCCCAACCTCACGCTCCCGGCTGTCCCGTCAGCGATTTTCTCCGCCGCCTTGGATTGGGCCTGAAGCGAGAGTGGCTGGCTGATTGTCTTCGCGCGCTCCAAGGCTCCGTGAGGGGATTCGAAGGGCTCGATGTGGCCGCACATGCCAAGCTTTGTTTCGAGCAGTTTCTGTTTGCTGATATGAACTTCTGTGGTGGCGGCGTGCTTCCTGCGAATGTGGATTCCATGCATCTCGATGTTCTCCCTGGTCCCTATGTATTGCAGGTTGATGAAATACTCAATATGAGTTGTCCTCTACGAGGCAGATATCAGAAAGCCAATCCTGGAGTTAAAAGGTGCCTGAAGTTGTCAATGACTGATGGTGTTCAGAGAGTCTTTGGAATGGAATACAGGCCTATTCAAGCTCTTGACGTTTGTGCCCCTTCTGGTTTAAAGGTTTCTATCTCTAATGTAAAGGTACGTCGTGGACTTTTGATGCTGGACCCTGAAACCGTTCAAATTAAAATTTTGGGGGGATTAGTTGAGCAGCTGGATGCAGCACGACAGCGGTTGGTTAAGGAATTAAATAAGCCACCTAGGGGGACAAGAACCAAAAATGGAGTGCTTCCTCCTTTGTCTACTAGAGCAACTCTTGCTGCATGGCCTTCAAGTAGAGTTGATGATCCTGGGCACACTGCCCCGATGTTGCACAGTACCGATTCTGTCCACACAAACAACCAAGGTGCTGGCCTGAGCATGCCTCACACTGGTCACCGCTTAACATCTGAAGATACTCTGCCCATGGGTGAACAAAATGCTGCTTCCAATTCAATACCTCACACGGTTTCAAATGCTGAGGCCAGGAATATGGATGTGCATAGGGGTACCTATCCTGTGTCCAGTGATAATTCTATGGGTAACCAGTTTCCTTCTAGTTTTGCAAGGGCTGAGGTGCATGTAGATACTCCTTATATCACTAGGCAAAATTCTGTTGGCAACCAGTCTTCTCATGCACACTCAAATGTTGCTGCGACACATGGAGATACTATTCATGTAACAAGAGAAAGTTCTGTGGCTACTATGTGCTCTCCTATTGCTGAAAATGTTGAGACTGACAAGTATAGAAACAGAATTCCTGTAACCACAATAACTGATAGTACTCCTCTGAGAGGATCCTCCTCTACTGTTTCAACAACTGATGATATCCTGATGGGTGATGCCAGTGACCATCCACTCATACTGTCCCCAGAACCTGGTAATATCATCAGGGAAAGTTCTGTTGGCAACCAATCTTCACACGTGCATTCAAATGTTGCAGTCGCAGACAAAGATAATGTTCATGTAACATGGGAAAGTTCTGTGGCTACTAAGTGCTCCCCCATTGCTGAAAATGTTGTGACAAACCATGATAAAATTCCTGTAATCACAATTTCAGACAATGTTCCTCTAAGAGGATCCTCCGCTGTTTCAAACACTGACGATGTCCTGATGGTTGATGCTGCCAGTGACCATCCACTCATGATGTCTGGTGATCGAGAAGTTCCTTTTACATACTTAGCTAGTTTATCAGCCAAATGGGCTGCAATGAAAGAGAAATCTCGTCTGGTTCAGGGTAAAATTAAGTGCTTTTTGACCGGTGTAAAAGGATTCCAGTATAAGAAAAGGACGACATATGAGCTTCAGGCATATGTAGATGATGGTAGCCTTATTTCTGAAATTATCATTGATCATGATGTTGTACAAAAAGGAATTGGTTATTCTCCTCAGGAGGTCACTGCAGCTCTTTCTTCTACTGACATGAAAACAGTCCAAAACATGAAGGAGACAATGCGTAAATTCCAAGCTTTTTTGGCAAACTTTGAGGGAATAATTCGAGTAGAATTCAATAGGAAATCTCCCATTCCACTTGCCCTAGAGATGAATCAAGGCTGTCCTCAATCTGATGCATGGTTACTCATGAGAAGGCTGAAGTCTCTTGACCCTGCACAAGTTCAAAATCATTCTCCTTTGGATCCAATTTATTTATCCCCGTAA 2208 0.4606 MHIRRLQLDFDSDEEQADVPPQPHKPTHQAPNPTNSPPEPVIISDEDFVDVSDDPSPPSPPPAPVPQPHAPGCPVSDFLRRLGLGLKREWLADCLRALQGSVRGFEGLDVAAHAKLCFEQFLFADMNFCGGGVLPANVDSMHLDVLPGPYVLQVDEILNMSCPLRGRYQKANPGVKRCLKLSMTDGVQRVFGMEYRPIQALDVCAPSGLKVSISNVKVRRGLLMLDPETVQIKILGGLVEQLDAARQRLVKELNKPPRGTRTKNGVLPPLSTRATLAAWPSSRVDDPGHTAPMLHSTDSVHTNNQGAGLSMPHTGHRLTSEDTLPMGEQNAASNSIPHTVSNAEARNMDVHRGTYPVSSDNSMGNQFPSSFARAEVHVDTPYITRQNSVGNQSSHAHSNVAATHGDTIHVTRESSVATMCSPIAENVETDKYRNRIPVTTITDSTPLRGSSSTVSTTDDILMGDASDHPLILSPEPGNIIRESSVGNQSSHVHSNVAVADKDNVHVTWESSVATKCSPIAENVVTNHDKIPVITISDNVPLRGSSAVSNTDDVLMVDAASDHPLMMSGDREVPFTYLASLSAKWAAMKEKSRLVQGKIKCFLTGVKGFQYKKRTTYELQAYVDDGSLISEIIIDHDVVQKGIGYSPQEVTAALSSTDMKTVQNMKETMRKFQAFLANFEGIIRVEFNRKSPIPLALEMNQGCPQSDAWLLMRRLKSLDPAQVQNHSPLDPIYLSP* 736
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja4g0467 735 MobiDBLite consensus disorder prediction 1 72 - -
Lja4g0467 735 PANTHER RECQ-MEDIATED GENOME INSTABILITY PROTEIN 1 RMI1 72 717 - -
Lja4g0467 735 MobiDBLite consensus disorder prediction 54 71 - -
Lja4g0467 735 MobiDBLite consensus disorder prediction 1 21 - -
Lja4g0467 735 Gene3D - 125 254 IPR042470 -
Lja4g0467 735 SMART DUF1767_2 76 169 IPR033472 -
Lja4g0467 735 MobiDBLite consensus disorder prediction 24 38 - -
Lja4g0467 735 Pfam RecQ mediated genome instability protein 81 247 IPR013894 -
Lja4g0467 735 Pfam Recq-mediated genome instability protein 1, C-terminal OB-fold 573 714 IPR032199 GO:0000166
Lja4g0467 735 PANTHER RECQ-MEDIATED GENOME INSTABILITY PROTEIN 1 72 717 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja4g0467 K10990 - gmx:100803734 805.438
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja4g0467 4 3809995 3814398 Lja4g0467 4 3809995 3814398 ECH