Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja4g0452 ATGGTATCATCATCCTCGCCGCAGCAGAAGATTCTGGTCACCGGCGGTGCCGGCTTCATCGGCACTCACACGGTGGTTCAGCTTCTCCATGACGGCTTCCATGTCTCCATCATCGACAATTTCGATAATTCCTGCATGGAAGCCGTCGACCGTGTCCGTGAAGTCGTTGGCCCTCACCTCTCCAAAAACCTCCAATTCACCCAGGGTGATCTCAGGAATAAGGATGACTTGGAGGAAATCTTCTCCAAAACAAAATTCGATGCTGTGATTCACTTTGCTGGGCTAAAAGCGGTTGGAGAAAGCGTTGCGAATCCCCGTCGCTATTTTGATTTCAATCTCGTTGGCACCATCAATCTCTATCAAGCTATGGCCAAGTATAACGTTAAAAAGATGGTTTTCTCTTCATCTGCAACAGTTTATGGCCAACCTCAAAAGATACCTTGCGTGGAGGATTTTGATTTACAAGCCATGAATCCCTATGGACGCACCAAGCTTTTCCTGGAAGAAATTGCCCGGGATATCCAGAAAGCTGAGCCAGAATGGAAGATCATTTTATTGAGATACTTCAATCCAGTAGGGGCGCATGAGAGTGGAAAACTTGGTGAAGATCCTAGAGGCATCCCAAATAACCTCATGCCTTACATTCAGCAAGTAGCTGTTGGAAGGTTACCTGAACTCAATGTATATGGTCATGATTATCCTACAAGAGATGGCTCTGCGATCCGGGACTATATCCATGTGATGGACTTAGCAGATGGTCACATTGCAGCTCTGAGAAAGCTTTTCACCACAGAGAACATAGGTTGTACTGCTTATAACCTGGGAACTGGTCGGGGTACATCTGTGCTTGAAATGGTTACTGCATTTGAGAAAGCTTCTGGCAAGAAAATTCCTGTTAAATTGTGTCCAAGAAGGCCGGGAGATGCCACAGAGGTTTATGCATCTACAGAGAAAGCTGAGAAAGAACTTAGTTGGAAGGCAAAGTATGGTGTAGAAGAGATGTGCAGGGACCAATGGAATTGGGCAAAGAACAATCCATGGGGTTACTCGGGGAAGCCTTGA 1062 0.4614 MVSSSSPQQKILVTGGAGFIGTHTVVQLLHDGFHVSIIDNFDNSCMEAVDRVREVVGPHLSKNLQFTQGDLRNKDDLEEIFSKTKFDAVIHFAGLKAVGESVANPRRYFDFNLVGTINLYQAMAKYNVKKMVFSSSATVYGQPQKIPCVEDFDLQAMNPYGRTKLFLEEIARDIQKAEPEWKIILLRYFNPVGAHESGKLGEDPRGIPNNLMPYIQQVAVGRLPELNVYGHDYPTRDGSAIRDYIHVMDLADGHIAALRKLFTTENIGCTAYNLGTGRGTSVLEMVTAFEKASGKKIPVKLCPRRPGDATEVYASTEKAEKELSWKAKYGVEEMCRDQWNWAKNNPWGYSGKP* 354
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja4g0452 353 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 9 349 IPR036291 -
Lja4g0452 353 Pfam GDP-mannose 4,6 dehydratase 12 337 IPR016040 -
Lja4g0452 353 CDD UDP_G4E_1_SDR_e 10 343 IPR005886 GO:0003978|GO:0006012
Lja4g0452 353 Gene3D - 11 282 - -
Lja4g0452 353 PANTHER BIFUNCTIONAL UDP-GLUCOSE 4-EPIMERASE AND UDP-XYLOSE 4-EPIMERASE 1 6 352 - -
Lja4g0452 353 Gene3D - 200 342 - -
Lja4g0452 353 PANTHER UDP-GLUCOSE 4-EPIMERASE 6 352 - -
Lja4g0452 353 TIGRFAM galE: UDP-glucose 4-epimerase GalE 10 346 IPR005886 GO:0003978|GO:0006012
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja4g0452 Lja-Chr4 3685998 3688904 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja4g0452 11 341 Miscellaneous Gene Families AT4G00110 26.724 1.41e-21 93.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja4g0452 K01784 - gmx:100803483 656.751
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja4g0452 4 3685998 3688904 Lja4g0452 4 3685998 3688904 ECH