Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja4g0444 ATGGGGGTTGGAACCAGCACCTTTGTCACTAGATGGATCAACTTTCTCACCATGCTTTCAGCCATTGTTGTGATAATGTTTGGGGTGTGGATGAGCACTCATCATGACAGCTGCAGAAAATCTCTCACTGTGCCTGTGCTAGGACTTGGAGCAGTTATTTTCTTAATATCCATGGTTGGTTTCCTTGGTGCCCTGAAAAACTGGTCCATACTGTTATGGATTTATCTGATCTTGTTGTTCTTGGTCTTGGTCGGAATCCTGGTCTTTACCGTATTGGTGTTCATTGTGACTAATGATGGATCAGGTCATAGTGTGACTGGCTTGAGGTATAAGGAGTATCAACTTCAAGATTATAGCTCTTGGTTTCTCAAAGAGTTAAACAATTCTCATAACTGGGAGCGATTGAGGGTTTGTCTTGTCAAATCTGAAGACTGCCATAAACTATCCAAAAAATATAAGAATCTTAAGCAATATAAATTAGCTAAATTGACACCAATGGAGGCTGGCTGCTGCCGACCACCTTCCGAATGCGGATATCCTGCTGTAAATGCATCCTACTATGATCTGACCTTTCATCCAGTAAGCCCTAACAAGGACTGCAAGCGGTACAAAAATTCTCAGGCCATCAAATGCTATGATTGTGATTCTTGCAAGGCAGGTGTGGCACAATACATGAAAACTGAGTGGAGAGTTGTGGCTATATTTAATGTTGTTTTATTTGTTGTCTTGTCTGTTATATACTTTGTGGGGTGCTGTGCGAGACGAAATGCTTCCAGAAGCCATTCTAAGGGTTGA 795 0.4176 MGVGTSTFVTRWINFLTMLSAIVVIMFGVWMSTHHDSCRKSLTVPVLGLGAVIFLISMVGFLGALKNWSILLWIYLILLFLVLVGILVFTVLVFIVTNDGSGHSVTGLRYKEYQLQDYSSWFLKELNNSHNWERLRVCLVKSEDCHKLSKKYKNLKQYKLAKLTPMEAGCCRPPSECGYPAVNASYYDLTFHPVSPNKDCKRYKNSQAIKCYDCDSCKAGVAQYMKTEWRVVAIFNVVLFVVLSVIYFVGCCARRNASRSHSKG* 265
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja4g0444 264 PRINTS Transmembrane four family signature 8 31 - -
Lja4g0444 264 PRINTS Transmembrane four family signature 39 65 - -
Lja4g0444 264 PRINTS Transmembrane four family signature 66 94 - -
Lja4g0444 264 PANTHER TETRASPANIN-8-RELATED 1 263 IPR044991 GO:0009734|GO:0016021
Lja4g0444 264 PANTHER TETRASPANIN-10 1 263 - -
Lja4g0444 264 Pfam Tetraspanin family 9 253 IPR018499 GO:0016021
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja4g0444 Lja-Chr4 3638215 3641643 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja4g0444 13 262 Miscellaneous Gene Families AT2G23810 38.735 3.53e-67 207
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja4g0444 - - gmx:100805679 456.447
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja4g0444 4 3638215 3641643 Lja4g0444 4 3638215 3641643 ECH