Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja4g0439 ATGGCCAAGATTTTTCCTCAAGAATCCACATCCTCTGAGTGCATCAATTCTGAAAGAGAAACATATACTCTATGGATGAAATCACTTGTTCTTCACTCTAATGGCTGCACTGTCTATGATTCAAATGGTGACATCGTTTACCGAGTTGATAACTATGACAGGAAGGGCACAAGAGAAGTTAACCTCATGGATCTAAGAGGCAAAGTTCTCTGCACCATAAAAAAGAGGCTACTAGCTATTGGAAGCTGGGAAGGTCACAGATATTGCAGCAATTCTAGTTATACAAGCCAGGAACAACCATGGTTTCAAGTTAAAAGATGTAATACAGGAAAAGTAGCTTGCCAGATCAAAGTGGGGTGTCAAAAGTACTGCATAGTAAGAATCAGTGGCAAAGCAGCAGCATTTAAGATAGTAACCAAAGATGGACACATAGTTGCAGAGGCAAAGCAAAAACACTCTCCCTCAGGTGTTGTTCTGAGCAATGATGTTCTGACCTTGGATATGGCTGCTGGCACGGATCATTCCCTTATAATGGCTTTGGTTACAGTTTATGGATTGATATGCGGTATAATGTAA 576 0.4062 MAKIFPQESTSSECINSERETYTLWMKSLVLHSNGCTVYDSNGDIVYRVDNYDRKGTREVNLMDLRGKVLCTIKKRLLAIGSWEGHRYCSNSSYTSQEQPWFQVKRCNTGKVACQIKVGCQKYCIVRISGKAAAFKIVTKDGHIVAEAKQKHSPSGVVLSNDVLTLDMAAGTDHSLIMALVTVYGLICGIM* 192
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja4g0439 191 PANTHER - 3 188 IPR007612 -
Lja4g0439 191 PANTHER PROTEIN LURP-ONE-RELATED 4 3 188 - -
Lja4g0439 191 SUPERFAMILY Tubby C-terminal domain-like 11 188 IPR025659 -
Lja4g0439 191 Pfam LURP-one-related 9 183 IPR007612 -
Lja4g0439 191 Gene3D - 10 189 IPR038595 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja4g0439 Lja-Chr4 3581628 3582942 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja4g0439 - - pvu:PHAVU_002G287800g 320.087
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja4g0439 4 3581628 3582942 Lja4g0439 4 3581628 3582942 ECH