Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja4g0437 ATGGAAGAAGCTCCACCACTTCCAGCTCCAGTTTCAGCATCACAATCGTGCTGGAGCAGCGTCGTGAAGAAGGAGCCACCGCAACCGCAACCGCAACAGCCCCTGCCGTTGCCGACCGAGCTAGTGTTGGAAGACACCACCCGCAGTAATGGCGGCATCTCGGTGGCCGTCATCGACGCCAACGCTATCATTGAAGCCGGCAAAAACCTCCATGGCTTCGCCGACAAGTTTGTCTCCGTCTCGGAAGTCATGCAGGAAATCCGTGACCCCGTCTCTCGCCACAAGCTCGCTTTCCTCCCCTTCACCATCCAAACCATGGAACCCTCCCCTGAATCCATCAGCAAAGTTGTGAAATTTGCTAGGGCTACTGGTGACCTACAGACTCTTTCTGATGTTGATATCAAGCTCATAGCTCTAACTTATACTTTGGAGGCTCAGATTCATGGAACAAAGCATCTCAGGGACTGCCCTCCTCCTGTGCAAGTGGTAAATGTGAAGAGGTTACCCGAGAAGGACTTGCCCGGATGGGGTACCAACGTGCCTAATTTGAAGGAGTGGGAAGCGTTAGAACAGGAAGCGGAGGACAAGGCGAATTCTACTTCAAGAATCCTTCCTTTGCAGGACTTGAACTTGAACATTGTTCCCCAGGATGACGAACGCTCTGCAGATGGTTTGGCGGAGCATGCAAGTGAAACTCATTCAGAAACTCAAGAGGGTGGTGAGGGTGGTTCAGTGAAGCCTAAGAAATATGTGTCTAAGAAAAAGGAGATAAACATTGAAGGGAAGGTTGTGGCTAATGGAGTTGACGCGTCCCAAGGACAATTTGATGATAATGCTGGTGATTGGTTGCCTGCGGTCAGTCGAAGTACTCATAGGAGGTTTCTTAGAAGGAAAGCAAGACGGGAGCAGTCTGAAGCATTATCCAGTAATCAAGATCACCAAGATTTGGAAGAAAACATTGATGGTAGTGTTGGTGAAGACGATAGAGCTTCAGATCAGCTTGTTCATCAAAGTGATGAAGAAAATCATATTGAAAATGTTGTATCCCAGGATGATCAGATAATAGCGGAGAACAAAGACAATGAAATTCTCTCTGCTACTCTGAAGCAAATGAGTCTGGATGGTGATGCAACTATGTGCACTAAATCATGTGAGACAGATACAGCAAATGACCAATCAAGTCACTTGGACATTGCAAGCCAGACTAGCGAAGCAGCTGATTTTTCATATGCAGATGATGATGGTAGTGAGCAAAGTTGGATGCTTAGATCGTTGTCTGAGTCAAGTGTAGCCTGTATTACTGGTGACTTTGCTATGCAAAATGTTCTTCTCCAAATGGGTTTGCGCTTGCTGGCGCCTGGTGGAACACAGATACACCAGCTGCATAGATGGGTACTGAAGTGTCATGCCTGCTTCACTGTTACTGCTGAAATCGGGAGGATTTTCTGTCCAAAATGTGGAAATGGTGGCACCTTAAGGAAGGTAGCTGTCACTGTTAATGAAAATGGAATAATGTTAGGAGCCCGCCGACCTCGAGTTTCATTACGTGGCACAAAGTTTTCGTTGCCTTTACCTCAAGGTGGAAGGGATGCAGTCACAAAGAACCTTGTTCTCCGTGAAGATCAACTTCCTCACAGGGTACTTTATCCTAAAACGAAGAAGAAAGCCACACAGGACGATGACTTCTTTACACCGGACAGTGTTTTTGGCCACCACACAGATAAGAGATCTCCTTTCCAGCCTCCCATAAGGAAAGCATTAGCAGTTTTCAGCGGCAGGAGAAACCCAAATGACAATCACTACTCACGCTCTAAGCGCAAGTAG 1824 0.472 MEEAPPLPAPVSASQSCWSSVVKKEPPQPQPQQPLPLPTELVLEDTTRSNGGISVAVIDANAIIEAGKNLHGFADKFVSVSEVMQEIRDPVSRHKLAFLPFTIQTMEPSPESISKVVKFARATGDLQTLSDVDIKLIALTYTLEAQIHGTKHLRDCPPPVQVVNVKRLPEKDLPGWGTNVPNLKEWEALEQEAEDKANSTSRILPLQDLNLNIVPQDDERSADGLAEHASETHSETQEGGEGGSVKPKKYVSKKKEINIEGKVVANGVDASQGQFDDNAGDWLPAVSRSTHRRFLRRKARREQSEALSSNQDHQDLEENIDGSVGEDDRASDQLVHQSDEENHIENVVSQDDQIIAENKDNEILSATLKQMSLDGDATMCTKSCETDTANDQSSHLDIASQTSEAADFSYADDDGSEQSWMLRSLSESSVACITGDFAMQNVLLQMGLRLLAPGGTQIHQLHRWVLKCHACFTVTAEIGRIFCPKCGNGGTLRKVAVTVNENGIMLGARRPRVSLRGTKFSLPLPQGGRDAVTKNLVLREDQLPHRVLYPKTKKKATQDDDFFTPDSVFGHHTDKRSPFQPPIRKALAVFSGRRNPNDNHYSRSKRK* 608
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja4g0437 607 MobiDBLite consensus disorder prediction 299 343 - -
Lja4g0437 607 CDD PIN_Nob1-like 57 168 IPR033411 -
Lja4g0437 607 SUPERFAMILY NOB1 zinc finger-like 458 521 IPR036283 -
Lja4g0437 607 Coils Coil 299 319 - -
Lja4g0437 607 Pfam Nin one binding (NOB1) Zn-ribbon like 458 528 IPR014881 -
Lja4g0437 607 Gene3D - 452 526 IPR036283 -
Lja4g0437 607 MobiDBLite consensus disorder prediction 220 235 - -
Lja4g0437 607 MobiDBLite consensus disorder prediction 12 26 - -
Lja4g0437 607 PIRSF Nob1 39 607 IPR017117 GO:0000469|GO:0004521|GO:0042274
Lja4g0437 607 PANTHER - 393 605 - -
Lja4g0437 607 PANTHER - 15 379 - -
Lja4g0437 607 MobiDBLite consensus disorder prediction 292 343 - -
Lja4g0437 607 MobiDBLite consensus disorder prediction 220 249 - -
Lja4g0437 607 MobiDBLite consensus disorder prediction 1 36 - -
Lja4g0437 607 PANTHER RNA-BINDING PROTEIN NOB1 393 605 IPR039907 -
Lja4g0437 607 PANTHER RNA-BINDING PROTEIN NOB1 15 379 IPR039907 -
Lja4g0437 607 Gene3D - 49 158 - -
Lja4g0437 607 Pfam PIN domain of ribonuclease 57 143 IPR033411 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja4g0437 K11883 - gmx:100800291 874.004
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja4g0437 4 3555524 3558866 Lja4g0437 4 3555524 3558866 ECH