Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja4g0434 ATGGAAGAGGATAGCCAAATAACAAAGGGAAAGTATGCTGCTGATATTTCCTCCATTAAGGAAGCCCATGATCGAATAAAATCGCAGGTTCTAATAACTCCAGTTCTCTCCTCCGCCTCTCTGAATGCTATATCAGGAAGGCAGCTGTACTTAAAGTGTGAATGTTTCCAAAAAGGTGGAGCTTTTAAATTTAGAGGTGCCTGCAATGCTGTTTTCTCTCTCAACGACGAAGATGCTTCCAAAGGGGTTATTACACACAGCAGTGGAAACCATGCTGCAGCGTTGGCTTTGGCAGCAAAACTACGCGGTATCCCTGCATATATAGTTATTCCAAAAAATGCTCCAACTTGCAAAGTTGAGAATGTAAAGCGGTACGGTGGTCAGGTTATCTGGTCTGATGCCTCTATGCAATCAAGGGAGGATACTGCAAAGAAAGTGTTGCAAGAAACTGGTGCTATCCTTATACATCCATATAATGATGGACGCATATTGAGTGGCCAGGGTACCATATCATTGGAGTTTCTGGAACAAGTCCCACATATCGATACGCTAGTGGTACCTATAAGTGGTGGTGGTTTGATATCAGGAGTAGCATTGGCTGCCAAGTCCATCAACCCGGCTATTCGGATTTTGGCTGCTGAACCTAAAGGGGCTGATGATGCAGCACAATCTAAGGCAGCTGGGAGGATAATAACATTGCCTGAGACCAATACTATAGCTGATGGGCTCAGAGCATTTCTTGGAGATTTCACATGGCCTGTGGTCCGAGATCTTGTTGAGGACATAATAACTGTAGACGACAGTGAAATCATAAAAGCCATGAAACTGTGTTTTGAAATTCTTAAGGTTGTTGTGGAACCAAGTGGAGCAATTGGCCTTGCTGCTGTTCTATCCGATACCTTCCAGAAAAATCCTGCATGGAAGGATTGCAACCATATTGGAATTGTAGTTTCAGGAGGCAATGTTGATCTGGCCGTGCTTTGGGATTCTTTTAACAAAGCAAAATGA 1008 0.4355 MEEDSQITKGKYAADISSIKEAHDRIKSQVLITPVLSSASLNAISGRQLYLKCECFQKGGAFKFRGACNAVFSLNDEDASKGVITHSSGNHAAALALAAKLRGIPAYIVIPKNAPTCKVENVKRYGGQVIWSDASMQSREDTAKKVLQETGAILIHPYNDGRILSGQGTISLEFLEQVPHIDTLVVPISGGGLISGVALAAKSINPAIRILAAEPKGADDAAQSKAAGRIITLPETNTIADGLRAFLGDFTWPVVRDLVEDIITVDDSEIIKAMKLCFEILKVVVEPSGAIGLAAVLSDTFQKNPAWKDCNHIGIVVSGGNVDLAVLWDSFNKAK* 336
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja4g0434 335 Pfam Pyridoxal-phosphate dependent enzyme 31 303 IPR001926 -
Lja4g0434 335 Gene3D - 22 323 IPR036052 -
Lja4g0434 335 ProSitePatterns Serine/threonine dehydratases pyridoxal-phosphate attachment site. 54 67 IPR000634 GO:0006520|GO:0030170
Lja4g0434 335 CDD Thr-dehyd 16 323 - -
Lja4g0434 335 PANTHER SERINE / THREONINE RACEMASE FAMILY MEMBER 30 333 - -
Lja4g0434 335 PANTHER - 30 333 - -
Lja4g0434 335 Gene3D - 62 158 IPR036052 -
Lja4g0434 335 SUPERFAMILY Tryptophan synthase beta subunit-like PLP-dependent enzymes 16 326 IPR036052 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja4g0434 Lja-Chr4 3537616 3540407 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja4g0434 K12235 - gmx:100799758 582.408
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja4g0434 4 3537616 3540407 Lja4g0434 4 3537616 3540407 ECH