Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja4g0430 ATGCTCTGTACTCGCATCTTGTTCTTCTCCAGAACTATAAGATTCGCTGCTCCTCTTTCTTCATCTTCTCTTCATTCCTTCGTCTTCTCAAATTCTCCCATCACCCTCTCGCGTTCTTATCACTCTTCTCTGCTTACTACTACTAGTTTTCCAATCAAATCACTTGTTTCTACTTCAACAACCCCTTTCTCTTTCACTCTCAGACCAGATCACACTATGGCTGCCCCCACATCCGTTTATGATTTCACCGTCAAAGATGCCAGAGGAAATGATGTTAATCTTGGTGACTACAAAGGAAAAGTCCTCTTGATTGTCAATGTTGCCTCACAATGTGGGTTGACTAATTCAAATTACACAGAGCTCAGCCAGTTGTATGAGAAATACAAATCAAAAGGTCTTGAAATTCTGGGTTTCCCATGTAATCAGTTTGGGGCACAGGAGCCTGGAGATAATGAACAGATACAAGAGTTTGTTTGCACTCGCTTCAAAGCTGAGTTCCCTGTTTTTGACAAGGTTGATGTGAACGGTGACAGTGCCGCTCCACTCTACAAATATCTAAAATCAAGCAAGGGAGGACTCTTTGGAGATAAAATCAAATGGAACTTCTCCAAGTTCCTTGTTGACAAAGAAGGAAATGTTGTTGAACGTTATGCACCAACAACTTCTCCTTTGAGCATTGAGGTAAGACAATATTTGTATGATGGCACCAATGATCTTTCCTAG 723 0.4122 MLCTRILFFSRTIRFAAPLSSSSLHSFVFSNSPITLSRSYHSSLLTTTSFPIKSLVSTSTTPFSFTLRPDHTMAAPTSVYDFTVKDARGNDVNLGDYKGKVLLIVNVASQCGLTNSNYTELSQLYEKYKSKGLEILGFPCNQFGAQEPGDNEQIQEFVCTRFKAEFPVFDKVDVNGDSAAPLYKYLKSSKGGLFGDKIKWNFSKFLVDKEGNVVERYAPTTSPLSIEVRQYLYDGTNDLS* 241
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja4g0430 240 ProSiteProfiles Thioredoxin domain profile. 73 237 IPR013766 -
Lja4g0430 240 PANTHER GLUTATHIONE PEROXIDASE 41 227 IPR000889 GO:0004602|GO:0006979
Lja4g0430 240 ProSiteProfiles Glutathione peroxidase profile. 69 240 IPR000889 GO:0004602|GO:0006979
Lja4g0430 240 ProSitePatterns Glutathione peroxidases signature 2. 136 143 IPR029760 -
Lja4g0430 240 ProSitePatterns Glutathione peroxidases active site. 99 114 IPR029759 -
Lja4g0430 240 Gene3D Glutaredoxin 71 233 - -
Lja4g0430 240 PRINTS Glutathione peroxidase family signature 97 114 IPR000889 GO:0004602|GO:0006979
Lja4g0430 240 PRINTS Glutathione peroxidase family signature 133 149 IPR000889 GO:0004602|GO:0006979
Lja4g0430 240 PRINTS Glutathione peroxidase family signature 198 207 IPR000889 GO:0004602|GO:0006979
Lja4g0430 240 PANTHER GLUTATHIONE PEROXIDASE 41 227 - -
Lja4g0430 240 SUPERFAMILY Thioredoxin-like 78 227 IPR036249 -
Lja4g0430 240 CDD GSH_Peroxidase 78 227 IPR000889 GO:0004602|GO:0006979
Lja4g0430 240 Pfam Glutathione peroxidase 79 187 IPR000889 GO:0004602|GO:0006979
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja4g0430 Lja-Chr4 3510771 3513121 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja4g0430 K00432 - gmx:100306295 306.605
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja4g0430 4 3510771 3513121 Lja4g0430 4 3510771 3513121 ECH