Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja4g0429 ATGAGCACCGAATCCACTAAGGATCATCCAAAGTCCCTGTACGATTTTTCTGTCAAGGATGCTAAGGGCAGTGATGTAGATCTTTCCACTTACAAGGGAAAAGTGCTTCTGATTGTTAATGTTGCTTCCAAATGTGGCATGTCCAACTCAAATTATGTGGAGTTAAATCAGCTACATGAGAAGTACAAGGACAAAGGCCTGGAGATTCTGGCATTTCCATGTAATCAATTTGGTGAGGAAGAACCCGGAAGCAATGATCAAATTTCTGAGTTCGTCTGCACTCGCTTTAAATCAGAATTCCCCATATTTGATAAGATTGAAGTGAATGGGGAAAATTCTGCTCCTTTGTATAAATTCTTAAAGTTAGGTAAGTGGGGAATTTTTGGGGATGATATTCAGTGGAACTTTGCCAAGTTTCTGGTTGACAAGGATGGCCAAGTGGTGGATCGCTATTATCCCACAACTTCTCCTCTTAGCCTTGAGCGAGATATTCGTAAGCTACTTGGTATTGTATGA 516 0.407 MSTESTKDHPKSLYDFSVKDAKGSDVDLSTYKGKVLLIVNVASKCGMSNSNYVELNQLHEKYKDKGLEILAFPCNQFGEEEPGSNDQISEFVCTRFKSEFPIFDKIEVNGENSAPLYKFLKLGKWGIFGDDIQWNFAKFLVDKDGQVVDRYYPTTSPLSLERDIRKLLGIV* 172
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja4g0429 171 PIRSF Glutathion_perox 1 169 IPR000889 GO:0004602|GO:0006979
Lja4g0429 171 ProSiteProfiles Thioredoxin domain profile. 7 169 IPR013766 -
Lja4g0429 171 SUPERFAMILY Thioredoxin-like 12 168 IPR036249 -
Lja4g0429 171 ProSiteProfiles Glutathione peroxidase profile. 3 171 IPR000889 GO:0004602|GO:0006979
Lja4g0429 171 PANTHER GLUTATHIONE PEROXIDASE 8-RELATED 6 170 - -
Lja4g0429 171 CDD GSH_Peroxidase 12 164 IPR000889 GO:0004602|GO:0006979
Lja4g0429 171 ProSitePatterns Glutathione peroxidases signature 2. 70 77 IPR029760 -
Lja4g0429 171 PRINTS Glutathione peroxidase family signature 31 48 IPR000889 GO:0004602|GO:0006979
Lja4g0429 171 PRINTS Glutathione peroxidase family signature 67 83 IPR000889 GO:0004602|GO:0006979
Lja4g0429 171 PRINTS Glutathione peroxidase family signature 132 141 IPR000889 GO:0004602|GO:0006979
Lja4g0429 171 Pfam Glutathione peroxidase 13 121 IPR000889 GO:0004602|GO:0006979
Lja4g0429 171 PANTHER GLUTATHIONE PEROXIDASE 6 170 IPR000889 GO:0004602|GO:0006979
Lja4g0429 171 Gene3D Glutaredoxin 3 170 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja4g0429 Lja-Chr4 3507865 3509727 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja4g0429 K00432 - gmx:100808523 312.383
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja4g0429 4 3507865 3509727 Lja4g0429 4 3507865 3509727 ECH