Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja4g0425 ATGCCTGTCATTTCCCGACTCGGTTCTTCCATGCACCACCATGCCTTCGTTCCACAAACCTTCGATGCTTCCCATGCCAGGAAATCCTCTTTTGTTGCTGCTTCTGGGAGTAGTAGACGGGGTCGTAGGTTGATTGTTGCTGCCAGCCCCCCTACTGAAGATGCTGTTGTTGCTACTGAACCGCTCACCAAGCAGGATCTCGTCGATTATCTTGCCTCTGGGTGTAAGCCCAAGCAAAACTGGAGAATAGGTACTGAACATGAGAAGTTTGGTTTTGAGTTGGGAAGCTTGCGTCCTATGAAGTATGAGCAAATAGCAGAACTGCTGAATGGCATTGCTGAGAGATTTGACTGGGATAAAATTATGGAAGGTGATAAAATTATTGGACTTAAACAGGGCAAGCAAAGCATATCATTGGAGCCAGGGGGTCAGTTTGAACTAAGTGGAGCTCCTCTTGAAACCTTGCATCAGACTTGTGCTGAAGTCAATTCTCACCTCTATCAGGTTAAAGCTGTTGCTGAAGAAATGGGAATTGGATTTTTGGGGATTGGTTTCCAGCCAAAGTGGGGACTCAAGGACATACCTATAATGCCAAAGGGAAGATATGAGATTATGAGGAATTACATGCCCAAAGTTGGTTCTCTTGGCCTTGACATGATGTTCAGGACATGTACTGTGCAGGTCAATCTGGACTTTAGTTCTGAAGCTGACATGATCAGGAAGTTTCGTGCTGGCTTAGCTTTGCAGCCTATAGCAACAGCCCTTTTTGCAAATTCACCCTTCAAAGAGGGAAAGCCTAATGGTTATGTCAGTATGAGAAGCCATATTTGGACTGATACTGATAAGGACCGCTCAGGCATGCTGCCCTTTGTTTTTGATGACTCCTTTGGGTTTGAGCAGTACGTTGATTATGCTCTTGATGTCCCAATGTATTTTGTCTATCGGAAACACAAATATATCGACTGTACTGGAATGACATTCAGGGACTTCTTGGCAGGAAAGCTTCCTTGCATTCCCGGTGAATTACCGACTCTCAATGATTGGGAGAATCACTTAACCACTATATTTCCTGAGGTCAGATTGAAGAGGTATTTGGAGATGAGAGGTGCTGATGGAGGGCCTTGGAGAAGGTTATGTGCTTTACCGGCATTTTGGGTAGGGTTATTGTATGATGAGGATTCTTTGCAAGGTGTTCTGGATTTGACTGCAGATTGGACTCAGCAAGAAAGACAAATGCTAAGGAATAAGGTTACTGTATCTGGTCTAAAAACACCATTCCGAGATGGTTTGCTGAAGCATGTTGCTGAAGATGTTCTAAAGTTGGCCAAGGATGGCTTGGAAAAAAGAGGCTTCAAGGAATCAGGATTTTTAAATGAGGTAGCGGAGGTGGTTAGAACAGGTGTCACTCCAGCTGAGAGGCTTTTAGAGTTGTATGATGGAAAGTGGAACCAATCTGTAGATCATGTGTTTGAGGAATTGCTTTATTGA 1488 0.4415 MPVISRLGSSMHHHAFVPQTFDASHARKSSFVAASGSSRRGRRLIVAASPPTEDAVVATEPLTKQDLVDYLASGCKPKQNWRIGTEHEKFGFELGSLRPMKYEQIAELLNGIAERFDWDKIMEGDKIIGLKQGKQSISLEPGGQFELSGAPLETLHQTCAEVNSHLYQVKAVAEEMGIGFLGIGFQPKWGLKDIPIMPKGRYEIMRNYMPKVGSLGLDMMFRTCTVQVNLDFSSEADMIRKFRAGLALQPIATALFANSPFKEGKPNGYVSMRSHIWTDTDKDRSGMLPFVFDDSFGFEQYVDYALDVPMYFVYRKHKYIDCTGMTFRDFLAGKLPCIPGELPTLNDWENHLTTIFPEVRLKRYLEMRGADGGPWRRLCALPAFWVGLLYDEDSLQGVLDLTADWTQQERQMLRNKVTVSGLKTPFRDGLLKHVAEDVLKLAKDGLEKRGFKESGFLNEVAEVVRTGVTPAERLLELYDGKWNQSVDHVFEELLY* 496
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja4g0425 495 SUPERFAMILY Glutamine synthetase/guanido kinase 73 493 IPR014746 GO:0003824
Lja4g0425 495 Gene3D - 47 495 - -
Lja4g0425 495 Pfam Glutamate-cysteine ligase family 2(GCS2) 113 394 IPR006336 GO:0004357|GO:0042398
Lja4g0425 495 PIRSF GCL 49 495 IPR035434 GO:0004357|GO:0006750
Lja4g0425 495 TIGRFAM glu_cys_lig_pln: glutamate--cysteine ligase 61 495 IPR011556 GO:0004357|GO:0006750
Lja4g0425 495 PANTHER GLUTAMATE--CYSTEINE LIGASE 23 495 - -
Lja4g0425 495 PANTHER GLUTAMATE--CYSTEINE LIGASE, CHLOROPLASTIC 23 495 IPR035434 GO:0004357|GO:0006750
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja4g0425 K01919 - gmx:547545 894.804
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja4g0425 4 3471569 3478931 Lja4g0425 4 3471569 3478931 ECH