Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja4g0424 ATGGTTGAATCAATGGCTGCTACTTCACTACTTGGCCACCGACCTATCTGTGAAGGAAATTTGATCAGGGATGTTTCTGGTAAGAGGAAATCTTTCAACAGTTGCTGCAGATTCCCAGCAGTTGAGTTTCTTGGTGGTAGGATTGTTGTTGCTCAGCCTTTGCCGAAATCCAAACACGGTAGCTTGTTGTCGTCGTCGTCATCGTCGATTAAGGCACTGGCTGTGGAGCTCACAAGAGAAGCACACTCTTACCAGGAAGAAAGATTGCCCGAGAAAGATAATAACAATAGCAGCAACAACAACAAGATTGATAGTGGTTTTGATCCAAGGCCTAGTTTGTGGCCTCCAGCTAATAGAGCAGATAACCCTTCGCTCGGGAATCCGTTGCTGCGGCAAGAGAGGATGGGATGTGGGTGGTTGGGGGCCATATTTGAGTGGGAGGGGGTTCTCATTGAAGCCAACCCTGATCTGGAGAAGCAAGCTTGGCTAGCTCTTGCTCAAGAAGAGGGTAAAGCCTCTCCTCCTGCTTTCATCCTCAAGAGAGTAGAGGGCATGAAGAATGAGCAAGCCATTTCTGAGGTTTTGTGCTGGTCCAGGGACCGTGGACAGCTTAGAAGATTGGCTGATAGAAAGGAAGAAATCTACCAAGCCTTGCAGGGTGGGATATACAGTCTCATGCCTGGCTCCAAAGAGTTTGTGAGTGTTTTGATGCATTATAAGATACCGATGGCATTGGTTTCGACGCGTCCGCGAAAAGCTCTTGAGGCTGCTATAGGGGAGATTGGTATCGGAGACAATTTCAGTGTTGTTGTAGCTGCAGAGGATGTTCACAGGGGAAAGCCTGATCCGGAGATGTTTATGTATGCTGCACAGCTTTTGAGCTTCATACCTGAGAGGTGCATTGTGTTTGGAAACTCGAATCAGACAGTGGAGGCCGCACATGATGCTCGGATGAAGTGTGTAGCTGTTGCTAGCAAGCATCCTGTGTATGAGCTGAGGGCTGCAGATTTAATCGTGAGGCGTTTAGATGAGCTAACCGTGGTTGATTTGAAGAATCTGGCCGATATTGAAGCAGCTGAATTTGACTCTGGGGAGCCTGAGGTGGAGCTGGAGCTGGATGAAGATTCTGATACATCATCTCTTGATGACAGTTTCTGGTAA 1161 0.4789 MVESMAATSLLGHRPICEGNLIRDVSGKRKSFNSCCRFPAVEFLGGRIVVAQPLPKSKHGSLLSSSSSSIKALAVELTREAHSYQEERLPEKDNNNSSNNNKIDSGFDPRPSLWPPANRADNPSLGNPLLRQERMGCGWLGAIFEWEGVLIEANPDLEKQAWLALAQEEGKASPPAFILKRVEGMKNEQAISEVLCWSRDRGQLRRLADRKEEIYQALQGGIYSLMPGSKEFVSVLMHYKIPMALVSTRPRKALEAAIGEIGIGDNFSVVVAAEDVHRGKPDPEMFMYAAQLLSFIPERCIVFGNSNQTVEAAHDARMKCVAVASKHPVYELRAADLIVRRLDELTVVDLKNLADIEAAEFDSGEPEVELELDEDSDTSSLDDSFW* 387
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja4g0424 386 CDD HAD_BPGM-like 203 325 - -
Lja4g0424 386 TIGRFAM HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 240 323 IPR006439 -
Lja4g0424 386 MobiDBLite consensus disorder prediction 362 386 - -
Lja4g0424 386 Pfam Haloacid dehalogenase-like hydrolase 159 323 IPR041492 -
Lja4g0424 386 Gene3D - 142 340 IPR023214 -
Lja4g0424 386 MobiDBLite consensus disorder prediction 362 380 - -
Lja4g0424 386 PANTHER BETA-PHOSPHOGLUCOMUTASE-LIKE ISOFORM X1 2 380 - -
Lja4g0424 386 MobiDBLite consensus disorder prediction 83 125 - -
Lja4g0424 386 Gene3D Putative phosphatase; domain 2 152 225 IPR023198 -
Lja4g0424 386 PANTHER 5-AMINO-6-(5-PHOSPHO-D-RIBITYLAMINO)URACIL PHOSPHATASE, CHLOROPLASTIC 2 380 - -
Lja4g0424 386 SUPERFAMILY HAD-like 142 345 IPR036412 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja4g0424 K22912 - gmx:100798181 555.058
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja4g0424 4 3453063 3454793 Lja4g0424 4 3453063 3454793 ECH