Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja4g0408 ATGAGAAGAGCTCATGGGAATGATGGCAGAGCTTCTGTCACCAATACTTTGGACACTATAAACGCTGCTGCTTCTGCCATAGCCTCTGCTCACACCCACAATCGCACTTCTCACCATCCTCTTGAGAAGAAAAGATGGAGAAGCTGGTTGAACATATCCGGGTGTTTTGGATATCACAACAAGAACGCAAGGCGCGTTGGGGACGCTGTCTTTGTTCCAGAAACGACGACTGCCGGAGCAAATCCTTCTGCACCTGTTAGCTCAACTCAAATAGCACCTAGCATAACACTTCCATTCATTGCACCTCCCTCATCTCCTGCATCTTTCTTTCAATCAGAGCATTCCTCGACTGCACAATCACCAGTTGGCATATTCTCAGTCACTTCGGTGTCCGCCAGCATGTACTCTCCTAGTAACCCTGCCTCAATCTTTGCCATTGGCCCTTATGCCAATGAAACCCAATTGGTTTCACCACCAATTTTCTCAGCATCATCCACTGCTCCTTTCACTCCGCCTCCTGAGTCGGTTCACTTGACCACACCTTCTTCACCTGAAGTGCCATTTGCTCACCTACTTGACCCCAACAACAACAGGAATGGTGGTGAGACTTATCAGAGGTTCCAAATATCTCACTATGACTTCCAATCTTATCAGTTTCATCCCGGAAGCCCGGTCGGTCCACTCATATCGCCGAGATCCGCCATCTCAGCTTCCGGCTCCTCATCTCCTTTCCTTGACTCCGAGTTTCATGCTGGTGACTTTAGAACAACAGAACCAGTCAAGCTTATTAGCTTGGATAAACTCTCATCAGCTTATGAAAAGCAAAACCAAAAGTCAAATCAAGGTTCTGGTTCTCTAACCCCAGATGCTGGTTTTCTTCCAAAACACTGGGTTTCTGAGATCAAAATGTCCCCGCGCCCAAGCAATAATCGCGCGAGTGAGATTAGCTTAAATCACCGAGTCTCATTTGAATTATCTGCACAAAAAGTACTGAGAACTGTGGAAAACAAGCAAGCAGCTTCATCATGGTCTAAAGTTGTGCCAAAATTGAAAAATGATGCAGCAACAGAAGACAAGGAAGAAAATGCAAGAGAAACTGAGGGGAATGACAAACAAGTTGTTGCTGAAACTCCCAATGGAGATGATGCAAAAGCTCATAAGAGGAATGAGTCCATAACCCTTTCTTCATCATTTGCTAGAGAATTCAACTTTGATAATGCAGAGGGGGGAGATTCTAATGCTCCCCATATTGTAGTTGCTGACTGGTGGGCTAATGAGAAAGTTGCCGGGAAGGAGGGAGCAGAGTCCTCCAAGAGTTGGTCTTTCTTCCCCATGATTCAATCTGGTGTCAACTAG 1356 0.4594 MRRAHGNDGRASVTNTLDTINAAASAIASAHTHNRTSHHPLEKKRWRSWLNISGCFGYHNKNARRVGDAVFVPETTTAGANPSAPVSSTQIAPSITLPFIAPPSSPASFFQSEHSSTAQSPVGIFSVTSVSASMYSPSNPASIFAIGPYANETQLVSPPIFSASSTAPFTPPPESVHLTTPSSPEVPFAHLLDPNNNRNGGETYQRFQISHYDFQSYQFHPGSPVGPLISPRSAISASGSSSPFLDSEFHAGDFRTTEPVKLISLDKLSSAYEKQNQKSNQGSGSLTPDAGFLPKHWVSEIKMSPRPSNNRASEISLNHRVSFELSAQKVLRTVENKQAASSWSKVVPKLKNDAATEDKEENARETEGNDKQVVAETPNGDDAKAHKRNESITLSSSFAREFNFDNAEGGDSNAPHIVVADWWANEKVAGKEGAESSKSWSFFPMIQSGVN* 452
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja4g0408 451 MobiDBLite consensus disorder prediction 351 371 - -
Lja4g0408 451 PANTHER HYDROXYPROLINE-RICH GLYCOPROTEIN-LIKE 6 450 IPR040420 -
Lja4g0408 451 PANTHER HYDROXYPROLINE-RICH GLYCOPROTEIN FAMILY PROTEIN 6 450 - -
Lja4g0408 451 MobiDBLite consensus disorder prediction 350 389 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja4g0408 Lja-Chr4 3292758 3296051 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja4g0408 - - gmx:100791666 561.222
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja4g0408 4 3292758 3296051 Lja4g0408 4 3292758 3296051 ECH