Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja4g0407 ATGGCACGGTTGGTTCTGCCATCGAAGACTCTCGCTTTTTCCAGGAAGAGTTTACTGGGTTTGATCTCCCCTGCTCCTCTTAACTATTTTCAGCATACAGCAAAAAGTAGCATCAGAGTTAGGCATTTCCTTGCTTCAGAGGTCATTTTGCAAAAGAAGTGTTGCTCTTGTTATTCTCCTCAGCCAAGGCTCAAGCAATTGAGTAGGAGGCTAATTTGTTCAGTTGCCACAGAGGATTTAGCTAAGCAAGTTGAAGAACCGAAAATGGGGACACCAAGAGAAATATTCTTAAAGGATTATAAAATGCCTGATTACTACTTTGAAAGTGTGAATCTGGAATTTTCCTTGGGAGAGGAGAGCACTAAAGTTAGTTCCAAAATTGCTGTGTTTCCTCGCGTTGAAGGTTCTTCTCCCCCGCTAGTTTTAGATGGACAAGACTTATCTTTAGTTTCAATTCAGATTAATGGAAAGGCTTTAAAGGAGGAAGACTATCATTTGGATGCACGCCATCTAACAATCCGTTCACCTCCAAGTGGTAAATATGATCTTGAAATTGTTACAGAGATTTACCCACAAAAAAACACATCATTAGAGGGACTTTACAAGTCGTCTGGGAATTTCTGTACTCAATGTGAGGCTGAAGGCTTCCGTAAAGTTACATTTTATCAGGATCGGCCTGATATAATGGCTAAGTATACAGTTCGCATCGAGGCAGATAAATCACTGTATCCGGTGTTATTGTCTAATGGAAACCTGCTTGAACAAGGTGACTTAGAGGATGGCAAGCATTATTCTGTTTGGGAGGACCCCTTCAAGAAACCTTGTTATTTGTTTGCCTTGGTTGCTGGGCAATTGCAGAGCAGAGATGACACTTTCACTACCCGTTCCGGACGGAAAGTGTCCCTTAGGATCTGGACACCTGCAGATGACGTACCTAAGACTGCACATGCTATGTATTCTCTGAAAGCAGCTATGAAGTGGGATGAAGATGTTTTTGGGCTTGAATATGACCTGGATCTCTTCAATGTTGTTGCTGTCCCAGATTTTAACATGGGAGCTATGGAAAATAAGAGCTTGAACATTTTCAATTCCAAGCTTGTATTGGCTTCTCCAGAAACTGCTACTGATGCAGATTATGCTGCAATATTGGGAGTTATTGGCCATGAGTATTTCCACAACTGGACTGGCAACAGAGTGACATGCCGTGACTGGTTCCAGCTTAGCCTGAAGGAAGGTCTCACTGTTTTTCGTGATCAGGAATTTTCAGCTGACTTGGGAAGTCGCACTGTAAAGCGGATTGCTGATGTTTCAAAACTTCGAAATTACCAGTTTCCACAGGATGCAGGTCCCATGGCCCATCCAGTGCGACCACACTCTTACATCAAGATGGACAACTTCTACACAGGCAAGTGTCTTTGTTTTAGACTTCTGGGGGCTGAAGTTGTCAGAATGTACAAAACCTTGCTGGGAAGTCAAGGGTTTCGAAAAGGCATGGATCTTTATTTTAAGAGACATGATGGACAAGCTGTAACATGTGAAGATTTTTTTGCTGCCATGCGGGATGCAAATGATGCAGATTTTGCAAATTTCTTACAATGGTACTCTCAAGCTGGGACTCCTGTTGTGAAAGTAAATACTTCTTATAATCCAGAAGCACATACTTTTTCTTTGAAGATCAGTCAAAAGATACCGCCAACACCAGGGCAATCAGTTAAGGAACCCATGTTCATTCCTGTTGCAATAGGTTTGCTTGATTCATCTGGCAAGGACATTCCTCTGTCAACTATTTATCATGATGGAACTCTGCAATCTGTTTCAAGCAATGGTCAATCAGTCAGCACTACAGTCCTGAGAGTCACTAAGATAGAAGAAGAGTTTGTGTTCAATGATATATTTGAGAAGCCTGTTCCATCATTGTTAAGGGGATACAGTGCTCCAGTTCGTCTTGAATCCGATCTCACTGACGACGACCTGTCTTTCCTACTAGCTAATGATTCTGATGAATTCAATCGTTGGGAAGCTGGACAAATTTTGGCACGAAAGTTGATGCTCAGCTTAGTGGATGATTTGCAACATAACAAACCACTGGTTCTGAATCCCAGTTTTGTTGATGGGCTCAAACGCATACTACGTGACTCAAGTTTGGACAAAGAGTTTGTGGCAAAGGCAATAACTCTACCTGGTGAGGGAGAAATAATGGACATGATGGAAGTTGCAGATCCTGACGCTGTTCATGCTGTTCGGACTTTCATCAGGAAGCAGCTTGCAAGCGAACTGAGATCGGAGTTCCTTAGCACAGTAGAAAATAATAGGAGCTCAGGAGAATATGTATTCAACCATTCAAACTTGGCCAGGCGTGCTTTGAAGAATATTGCTCTCGCTTATCTTGGATCCCTTGAGGGTCAAGAATTTACCAGCCTTGCACTGAATGAGTATAAAGCTGCTACAAATATGACTGAGCAGTTTGCTGCTATGGCTGCCTTAGCCCAGATCCCTGGTAAAACTCGTGATGATGTTCTTGCTGACTTTTATAGCAAGTGGCAACATGATTTCTTGGTGGTGAATAAATGGTTTGCTCTTCAAGCAATGTCTGACATTCCTGGTAATGTTGAGAATGTGCGGAAACTGTTAAGCCACCCGGCATTTGACCTGCGCAATCCCAACAAAGTGTACTCTCTCATTGGAGGTTTCTGTGGGTCTCCGGTAAACTTTCATGCAAAGGACGGTTCAGGCTACACGTTTTTGGGAGAAATTGTGCTGCAACTTGACAAAATAAATCCTCAGGTTGCCTCAAGAATGGTGTCAGCCTTCTCAAGATGGAGACGTTATGATGAAGATAGACAAAAGCTTGCAAAGGCTCAGCTGGAGAAGATCATGTCTATTAATGGACTATCGGAGAATGTTTTTGAGATTGCTTCGAAAAGCTTAGCTGCATAA 2937 0.4253 MARLVLPSKTLAFSRKSLLGLISPAPLNYFQHTAKSSIRVRHFLASEVILQKKCCSCYSPQPRLKQLSRRLICSVATEDLAKQVEEPKMGTPREIFLKDYKMPDYYFESVNLEFSLGEESTKVSSKIAVFPRVEGSSPPLVLDGQDLSLVSIQINGKALKEEDYHLDARHLTIRSPPSGKYDLEIVTEIYPQKNTSLEGLYKSSGNFCTQCEAEGFRKVTFYQDRPDIMAKYTVRIEADKSLYPVLLSNGNLLEQGDLEDGKHYSVWEDPFKKPCYLFALVAGQLQSRDDTFTTRSGRKVSLRIWTPADDVPKTAHAMYSLKAAMKWDEDVFGLEYDLDLFNVVAVPDFNMGAMENKSLNIFNSKLVLASPETATDADYAAILGVIGHEYFHNWTGNRVTCRDWFQLSLKEGLTVFRDQEFSADLGSRTVKRIADVSKLRNYQFPQDAGPMAHPVRPHSYIKMDNFYTGKCLCFRLLGAEVVRMYKTLLGSQGFRKGMDLYFKRHDGQAVTCEDFFAAMRDANDADFANFLQWYSQAGTPVVKVNTSYNPEAHTFSLKISQKIPPTPGQSVKEPMFIPVAIGLLDSSGKDIPLSTIYHDGTLQSVSSNGQSVSTTVLRVTKIEEEFVFNDIFEKPVPSLLRGYSAPVRLESDLTDDDLSFLLANDSDEFNRWEAGQILARKLMLSLVDDLQHNKPLVLNPSFVDGLKRILRDSSLDKEFVAKAITLPGEGEIMDMMEVADPDAVHAVRTFIRKQLASELRSEFLSTVENNRSSGEYVFNHSNLARRALKNIALAYLGSLEGQEFTSLALNEYKAATNMTEQFAAMAALAQIPGKTRDDVLADFYSKWQHDFLVVNKWFALQAMSDIPGNVENVRKLLSHPAFDLRNPNKVYSLIGGFCGSPVNFHAKDGSGYTFLGEIVLQLDKINPQVASRMVSAFSRWRRYDEDRQKLAKAQLEKIMSINGLSENVFEIASKSLAA* 979
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja4g0407 978 Pfam Domain of unknown function (DUF3458) Ig-like fold 538 651 IPR035414 -
Lja4g0407 978 Pfam Peptidase family M1 domain 319 532 IPR014782 GO:0008237|GO:0008270
Lja4g0407 978 PANTHER BNAC06G01820D PROTEIN 63 978 - -
Lja4g0407 978 PRINTS Membrane alanyl dipeptidase (M1) family signature 349 359 IPR001930 GO:0006508
Lja4g0407 978 PRINTS Membrane alanyl dipeptidase (M1) family signature 404 416 IPR001930 GO:0006508
Lja4g0407 978 PRINTS Membrane alanyl dipeptidase (M1) family signature 385 400 IPR001930 GO:0006508
Lja4g0407 978 PRINTS Membrane alanyl dipeptidase (M1) family signature 267 282 IPR001930 GO:0006508
Lja4g0407 978 SUPERFAMILY Leukotriene A4 hydrolase N-terminal domain 93 283 IPR042097 -
Lja4g0407 978 PANTHER - 63 978 IPR012779 GO:0008270
Lja4g0407 978 Pfam Peptidase M1 N-terminal domain 110 277 IPR045357 -
Lja4g0407 978 Gene3D - 286 370 - -
Lja4g0407 978 Pfam Domain of unknown function (DUF3458_C) ARM repeats 655 977 IPR024601 -
Lja4g0407 978 Gene3D - 653 977 IPR037144 -
Lja4g0407 978 SUPERFAMILY Metalloproteases ("zincins"), catalytic domain 295 545 - -
Lja4g0407 978 Gene3D - 538 651 IPR038438 -
Lja4g0407 978 Gene3D Neutral Protease Domain 2 371 537 IPR027268 -
Lja4g0407 978 TIGRFAM pepN_proteo: aminopeptidase N 99 976 IPR012779 GO:0008270
Lja4g0407 978 Gene3D tricorn interacting facor f3 domain 102 285 IPR042097 -
Lja4g0407 978 CDD M1_APN 99 535 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja4g0407 Lja-Chr4 3277014 3285006 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja4g0407 K01256 - gmx:100775476 1732.61
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja4g0407 4 3277014 3285006 Lja4g0407 4 3277014 3285006 ECH