Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja4g0396 ATGAAAATGGCGGAGAAGGAAGCAGAGAAGCTAATTTGGGAACACGTCAGAAGCCCTAAATCTGCAACCACCGCCATTAATGGACCACAGTCACGAACCTTACACAAGCTTCTCTTCTTGCTAATCTTCTTCGTCTCCCTCACCTACGTCATCTACACGCTCAAACTCATCTCCACCTCACGCTCTTGCCACCACATCGAAACCCCTTTCCCCAACCACGCCCTCGCCTCCCGTGAAACCGAAACAGAAACGGTAACCCACCGCGCCGACACCCAAACGGAGCTCCGGCACGTGGTGTTCGGGATCGCCGCGTCGGCCAAGCTATGGGACCAGAGGAAGAACTACATCAAGCTCTGGTACAGGAGGAGAGAGATGCGGGGCGTGGTGTGGCTGGACAACAAGGTGAAGACGCGGGAAGGCGACAGGATTCTCCCGCCGGTGAGGATCTCCGGCGACACGTCGAGATTCTCATACACGAACCGGCAGGGGCACCGGTCGGCGATCAGGATCTCGCGGATCGTGTCGGAGACGCTGCGCCTCGGGATGAAGGATGTGCGGTGGTTCGTGATGGGCGACGACGACACCGTTTTCGTCACCGATAACCTTGTTAGGATTCTGAGGAAGTATGACCATACCCAATACTATTACATTGGGAGCTTATCGGAGTCTCACTTGCAGAACATCTTCTTCTCCTACGGCATGGCCTACGGCGGAGGAGGCTTCGCTATCAGCTACCCTTTGGCGAAAGCTCTCAGCAAAATGCAGGACCGTTGCATTCAGAGGTACCCGGGACTCTACGGCTCCGATGACAGAATGCAAGCTTGTATGGCCGAACTCGGTGTTCCACTCACTAAAGAAACCGGTTTCCACCAGTATGATGTGTATGGGAACCTGTTCGGTCTTCTTGCAGCTCATCCTGTGACTCCATTGGTGTCATTACACCACCTTGATGTGGTTGAGCCAATCTTCCCCAACGTGACTAGGGTGCAAGCTCTTCAACGCCTTACTATACCGATGAAGCTTGACTCTGCCGGGCTAATGCAACAATCAATCTGCTACGACAGATCGAAAAGCTGGACGGTTTCCGTTTCATGGGGTTTTGCTGTTCAGATATTTCGGGGCATATTTTCACCCCGGGAGATGGAAATGCCTTCTAGAACATTTTTGAACTGGTATAAAAGGGCAGATTACACTGCTTATGCATTTAACACGCGGCCAGTTAGCAGAAATCCATGCCAGAAGCCTTTTGTATTTTATTTCTCCAAGGCACAACAGAATTCCACACTGCAGCAGACAGTGACTGAGTATGATAGGCATCGTGTCCCTCACCCGGAATGCCGGTGGAAGATGGCTGATCCTTCTTCTCTTGAGAAAGTCACAGTATATAAGAAGCCAGATCCACATCTTTGGGAAAGAGCCCCGAGGAGAAACTGTTGCAGAGTGAGGAAATCAACGACGAAGAAAGGAACCATGGTTATAGATGTGGGTGAGTGTAGGGAAGATGAGTTAAGCGAAGCATAG 1521 0.5161 MKMAEKEAEKLIWEHVRSPKSATTAINGPQSRTLHKLLFLLIFFVSLTYVIYTLKLISTSRSCHHIETPFPNHALASRETETETVTHRADTQTELRHVVFGIAASAKLWDQRKNYIKLWYRRREMRGVVWLDNKVKTREGDRILPPVRISGDTSRFSYTNRQGHRSAIRISRIVSETLRLGMKDVRWFVMGDDDTVFVTDNLVRILRKYDHTQYYYIGSLSESHLQNIFFSYGMAYGGGGFAISYPLAKALSKMQDRCIQRYPGLYGSDDRMQACMAELGVPLTKETGFHQYDVYGNLFGLLAAHPVTPLVSLHHLDVVEPIFPNVTRVQALQRLTIPMKLDSAGLMQQSICYDRSKSWTVSVSWGFAVQIFRGIFSPREMEMPSRTFLNWYKRADYTAYAFNTRPVSRNPCQKPFVFYFSKAQQNSTLQQTVTEYDRHRVPHPECRWKMADPSSLEKVTVYKKPDPHLWERAPRRNCCRVRKSTTKKGTMVIDVGECREDELSEA* 507
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja4g0396 506 Pfam Protein of unknown function, DUF604 226 479 IPR006740 -
Lja4g0396 506 Gene3D - 85 342 - -
Lja4g0396 506 PANTHER FRINGE-RELATED 25 505 - -
Lja4g0396 506 PANTHER TRANSFERRING GLYCOSYL GROUP TRANSFERASE 25 505 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja4g0396 Lja-Chr4 3171554 3175371 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja4g0396 1 506 Glycosyltransferase AT4G23490 68.293 0.0 731
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja4g0396 - - gmx:100818244 836.639
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja4g0396 4 3171554 3175371 Lja4g0396 4 3171554 3175371 ECH