Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja4g0391 ATGCCTGCAACAACAGAGAATAATCAAGGCTCATTCCTGGGCCGAATAAGCATTCGAAGAAACCAAGTCATGTCCATGGACGGAAGCCACGACCAGGAGCAAGAAGACCTTGAGCTTTTCCAAAAGCACGTCAGCGACCGCTTCGCTGATCTCCTCTCCTCCACCACCGACGACCCTTCTGGCGCCGGTTATTCCCTTCTATCCATCGGCTGGCTCCGCAAGCTCCTGGACGAGCTCCTCTGCTGCGAGGCTGAATTCAAAGCCGTTGTCATGATGGGCCGCGACCCTTCCCAGATCTCTAAGCCACCGCTCGACCGCCTCCTCCCGGAGTTTCTCGACCGTGTCGTCAAGTCCCTTGACGTCTGCAATGCCGTCGCCCTCGGTATCGACTCGCTTCGCAACCTCCAGCGTCTTGCGGAGATTGCCGTGGCCGCGCTTGAGCCGAGGCCTATGGGCGACGGCCAGGTCCGCCGCGCTAAGAAGGCGCTCAACGCCCTCATCGCCGCGATGATGCACGAGGACAAGGACAGCGGCAACACAAAAGGAACCGAGAGGACCAGGTCCTTCGGAAGAAGAGGCGGCGGTGGAGGAGGGAACAAGGACCAGCGCGCCGGCGGGCCATTCCGGTCACTTTCATGGAGCATGGCGAGGAATTGGTCCTCAGCGAAACAAATCCATGCCATGACCTCTAACCTGGTCGCGCCACGTGGTGCGGAATCAACCGGGCTGGCCGCACCGGTCTACATCATGAGCACTATTCTGGTGTTCGTGATGTGGACTTTGGTTGCGGCCATTCCGTGTCAAGAGAGGAATGGGCTCGGGACCCATTTTCCTCTCCCGAGGCAATTGGGCTGGGCCCAGCCCATGATTGGGTTGCAGGAGAAGATTGCGGAGGAGTGGAAGAAGAAGGAGAAGAAAGGATTTGTTGGGTTGCTTGAGGAGATGCAGAGGATGGAGAAGCTGGGGCAGTTGCTGATTGAATTTGCTGACTCGTTTCAGTTCCCAGCTGAAACGGAGCGTTTGGAGGAGGTGAAGGGACACGTGGAGGAGCTAGGGGACATTTGCAGGAAGATGGAGGAAGGGTTGGAACCATTGCAGCAGCAGATTAGAGAGGTGTTTCACAGGCTTGTCAGGAGCAGAACTGAGTTTCTTCTTGTGTTGGATCAAGGAGGGAAATCTTCAGCACCCACTGTGTAA 1197 0.5698 MPATTENNQGSFLGRISIRRNQVMSMDGSHDQEQEDLELFQKHVSDRFADLLSSTTDDPSGAGYSLLSIGWLRKLLDELLCCEAEFKAVVMMGRDPSQISKPPLDRLLPEFLDRVVKSLDVCNAVALGIDSLRNLQRLAEIAVAALEPRPMGDGQVRRAKKALNALIAAMMHEDKDSGNTKGTERTRSFGRRGGGGGGNKDQRAGGPFRSLSWSMARNWSSAKQIHAMTSNLVAPRGAESTGLAAPVYIMSTILVFVMWTLVAAIPCQERNGLGTHFPLPRQLGWAQPMIGLQEKIAEEWKKKEKKGFVGLLEEMQRMEKLGQLLIEFADSFQFPAETERLEEVKGHVEELGDICRKMEEGLEPLQQQIREVFHRLVRSRTEFLLVLDQGGKSSAPTV* 399
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja4g0391 398 PANTHER BPS1-LIKE PROTEIN 1 393 - -
Lja4g0391 398 MobiDBLite consensus disorder prediction 175 207 - -
Lja4g0391 398 Pfam Protein ROH1-like 6 386 IPR008511 -
Lja4g0391 398 PANTHER OS02G0109200 PROTEIN 1 393 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja4g0391 Lja-Chr4 3128131 3129747 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja4g0391 - - lja:Lj4g3v2990070.1 724.546
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja4g0391 4 3128131 3129747 Lja4g0391 4 3128131 3129747 ECH