Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja4g0389 ATGAAGAAAGTGGTGGTAAAGTTGGATTTGCACGATGACAAAGCAAAGCAGAAAGCCATGAAAACAGTTTCTAGTCTTTCAGGCATTGATTCCATCGCCATGGACATGAAAGAGAAGAAACTTACTGTAGTGGGTGACATTGACCCTGTCGATGTTGTGAGCAAATTGAGAAAGACTTGGCACACAGAAATTTTATCAGTTGGGCCGGCAAAAGAGCCAGAGAAGAAGAAAGAAGAAGCTAAAAAAGATGATGGGAAAAAAGATGACAATAAGAAGAAAGATGGTGGTGGTGATAAGAAGAAAGATGAAAGTGAACAAATTGCTGAGCTTGTCAAGCTCTACAAAGCATACAATCCCTACATGACTTCATACTATCATGTTCAGAGTGCAGAAGAGAATCCAAATGCTTGTGCTATTTGTTGA 423 0.3948 MKKVVVKLDLHDDKAKQKAMKTVSSLSGIDSIAMDMKEKKLTVVGDIDPVDVVSKLRKTWHTEILSVGPAKEPEKKKEEAKKDDGKKDDNKKKDGGGDKKKDESEQIAELVKLYKAYNPYMTSYYHVQSAEENPNACAIC* 141
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja4g0389 140 PANTHER HEAVY METAL-ASSOCIATED DOMAIN PROTEIN 1 140 - -
Lja4g0389 140 Gene3D - 1 72 - -
Lja4g0389 140 MobiDBLite consensus disorder prediction 66 104 - -
Lja4g0389 140 Pfam Heavy-metal-associated domain 6 61 IPR006121 GO:0046872
Lja4g0389 140 PANTHER COPPER TRANSPORT PROTEIN FAMILY-RELATED 1 140 - -
Lja4g0389 140 SUPERFAMILY HMA, heavy metal-associated domain 1 59 IPR036163 GO:0046872
Lja4g0389 140 MobiDBLite consensus disorder prediction 68 104 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja4g0389 Lja-Chr4 3116206 3118929 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja4g0389 - - aprc:113855312 192.2
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja4g0389 4 3116206 3118929 Lja4g0389 4 3116206 3118929 ECH