Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja4g0381 ATGAGGAGGTTGCTTTCTAGGTTCAAGTTTCTATCAAGAGCAGTGCATGAGGGTGAGCATGAGCATGAGCATGATCATGGGGAGAGAAACAACAAGTACCCTATGACAGAAGGAGGTTTGTGCACAACAACATCACTCACAGTTTGGAGAAAATCCCTTGTGATTAGTTGTAAAGGAGGATTCACAGTGATTGATTCACATGGAAATCTGGTGTATCGGGTTGACAATTACATCTTGCACCCAGATGAAGTCACTCTCATGGACGCTTCAGGAAACTCTCTCCTCACCATGCGTCACCGCCGCAAGAAGCTTGGGTTAGTAGATAGTTGGTTTGTATATGAAGGGGAAACAGGGAAACTGCATATAAAGAGGAGCAAGTTAGGCAACTTAAGAAAGAGTCCAGTTTGTTGTGTAAGGAAGCGTGTGAACATTTTAAATGGCAATTCCGGGGTTCAAGCATGCGTGTACCGTGTAGCACCGGATTCAGATGACAAAGGGCACGCGATGTTTACGGTTGAAGGCTCTTATGCAGACAGGACGTGTAAGGTGTTGGATGAGTACAAGAAAACCGTAGCTGAAATCAAGAGAAAGGAGGCAAATAGCAAAGATGTCTCTTTCGGGATTGAGATTTTTCAGTTAATTGTTCATCCTGGGTTTGATCCTGCCTTTGCCATGGGACTCGTTTTGCTACTGGATCAAATGTTTTCATAA 711 0.4402 MRRLLSRFKFLSRAVHEGEHEHEHDHGERNNKYPMTEGGLCTTTSLTVWRKSLVISCKGGFTVIDSHGNLVYRVDNYILHPDEVTLMDASGNSLLTMRHRRKKLGLVDSWFVYEGETGKLHIKRSKLGNLRKSPVCCVRKRVNILNGNSGVQACVYRVAPDSDDKGHAMFTVEGSYADRTCKVLDEYKKTVAEIKRKEANSKDVSFGIEIFQLIVHPGFDPAFAMGLVLLLDQMFS* 237
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja4g0381 236 PANTHER - 19 235 IPR007612 -
Lja4g0381 236 Pfam LURP-one-related 44 229 IPR007612 -
Lja4g0381 236 Gene3D - 41 236 IPR038595 -
Lja4g0381 236 PANTHER PROTEIN LURP-ONE-RELATED 17 19 235 - -
Lja4g0381 236 SUPERFAMILY Tubby C-terminal domain-like 43 235 IPR025659 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja4g0381 Lja-Chr4 3059054 3061830 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja4g0381 - - lja:Lj0g3v0155199.1 466.463
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja4g0381 4 3059054 3061830 Lja4g0381 4 3059054 3061830 ECH