Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja4g0378 ATGTCTCAGAATCGAAGCCCAAGCGAGTTCAAGCCTCTAGCTCCATCCATAGTAGCATATCCTTACTTTGGAAGCCCCTTTAGAAGCCCAGAAGATCCACAACACCCCATCATATCAGAAACACAAATTTCTCGATTGAAAAAGTGCGTCCTCTTCTGCGGATGCATCACCGCACTTCTTGTGATCTTCTTCGTCATCCTCATAGTCCTCGCCTTCACTGTCTACAATGTCAAAGACCTAAAGGTAAAGATTAACAGAGTTACCCTTGTCAACGGAACTCTCACAAACGGAGCCACCGAAAACCTCACCGTGCTCAACGATGTCTCTGTGAAGAACACGAATTATTTCACCTACAAATACAGTAACTCGACCACCACTTTCTTCTACGACGGCGTGGCGATCGGAGAAGGTGTTACGCCGGCGGGGAAGGCGAAAGCGAGAAGGACGATGCGGCTGAACGTGACGTCGGTGGTTGTGACGAAGAAACTAGTGGGGATTCCGAATTGGGCGATTGATATTAGAGATGATGTTTTCAATATCAGCAGCTATACGAGGATTGATGGGAAGGTGAAAGTGCTGGGAATGTTTAATAGGAAGGTTGTGGTTGAGATGAATTGCACGAGTCAGTACAACAGAAACACTGGTTTGATCACGCGTGGTAACAATTGCTTGGGAAATATTGATATTTAG 690 0.4609 MSQNRSPSEFKPLAPSIVAYPYFGSPFRSPEDPQHPIISETQISRLKKCVLFCGCITALLVIFFVILIVLAFTVYNVKDLKVKINRVTLVNGTLTNGATENLTVLNDVSVKNTNYFTYKYSNSTTTFFYDGVAIGEGVTPAGKAKARRTMRLNVTSVVVTKKLVGIPNWAIDIRDDVFNISSYTRIDGKVKVLGMFNRKVVVEMNCTSQYNRNTGLITRGNNCLGNIDI* 230
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja4g0378 229 PANTHER LATE EMBRYOGENESIS ABUNDANT (LEA) HYDROXYPROLINE-RICH GLYCOPROTEIN FAMILY 39 227 - -
Lja4g0378 229 PANTHER LATE EMBRYOGENESIS ABUNDANT PROTEIN 39 227 - -
Lja4g0378 229 Gene3D - 66 207 - -
Lja4g0378 229 SUPERFAMILY LEA14-like 78 166 - -
Lja4g0378 229 Pfam Late embryogenesis abundant protein 108 206 IPR004864 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja4g0378 Lja-Chr4 3032568 3033680 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja4g0378 - - gmx:100527705 243.047
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja4g0378 4 3032568 3033680 Lja4g0378 4 3032568 3033680 ECH