Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja4g0373 ATGTTGAGCACCTCTTCTTCTTCTCGCTCTCTCTTTGCGCGCTCCTTTCTTCCAATTAAGGGTTTCCCAGGACCCCCTACACTCCGTCCTTTCCCCACAACTTCTCGGATCTTCGAATCGAATCTCAACTCTCCCAAAAACAAGTTAAGTATTTTGTGCTTTAGGCACGAGCATCATTCTCCAGAAACACCCAAGCCTGAAGTTATTGACCAGTATCTTTGCGAGGAATCGGTGCAATCTGAATCCAATGACTCTAGTGTCACCAAGCGGGACCAGAATTTGATCCTTCAAAAGGTTGCGAGTGAAGTATTCAAGGTATTTGGAAATCGATGGGTTGTACCATGGACTGCAGTAACCATATTACAAGTTATGCTTCTGTGGACATCGGCATTTTGGTTCATAGGATCTTGGATGATTCCTTTTGCGGCCCACATAACTGGCTTTAGCAAAGATTCTTTGACATTTAGAGGCCAGGCACTGTTTAGCCTTATTACTGATGTTACTGAAGGACTCGCCGGAATTGCAATTCTTCATCATTGTCTTTCTCGATTCCGCCCCCTTCCACCTGACTGGTTCAAGTTTAGCCTGAAAGGGACTTGGCAACCAGATGTCATCATAGGGTGTCTCATGTTTCCGCTCGTCAACCGGCTCTCGCAGTTCAACCTCGACCTGTTACCTCTCTTGCCATCTACACCTGTCACCCTTTCTAGTGTTGAACACTCAATAAGGGCAAGGGATCCCGTGGCAATGTTATTATATGCGTTAGTAGTATCAGTGTGTGCTCCTGTGTGGGAGGAGATAGTTTTCCGTGGTTTTCTACTCCCATCCCTTTCCAAATACATGCCTGTGTGGTGTGCAATACTGGTAAGTTCAATTGCCTTTGCGCTTGCACATTTTAATATTCAAAGGATGCTGCCACTTATATTTCTTGGAATGGTGATGGGTATCATATTTACGCGGTCAAGGAATTTATTACCATCAATGCTATTGCATAGCCTTTGGAATGCCTTTGTCTTCTTAGATTTGATGAAATAG 1035 0.4444 MLSTSSSSRSLFARSFLPIKGFPGPPTLRPFPTTSRIFESNLNSPKNKLSILCFRHEHHSPETPKPEVIDQYLCEESVQSESNDSSVTKRDQNLILQKVASEVFKVFGNRWVVPWTAVTILQVMLLWTSAFWFIGSWMIPFAAHITGFSKDSLTFRGQALFSLITDVTEGLAGIAILHHCLSRFRPLPPDWFKFSLKGTWQPDVIIGCLMFPLVNRLSQFNLDLLPLLPSTPVTLSSVEHSIRARDPVAMLLYALVVSVCAPVWEEIVFRGFLLPSLSKYMPVWCAILVSSIAFALAHFNIQRMLPLIFLGMVMGIIFTRSRNLLPSMLLHSLWNAFVFLDLMK* 345
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja4g0373 344 PANTHER - 44 342 - -
Lja4g0373 344 Pfam Type II CAAX prenyl endopeptidase Rce1-like 251 336 IPR003675 GO:0004222|GO:0016020|GO:0071586
Lja4g0373 344 PANTHER CAAX AMINO TERMINAL PROTEASE 44 342 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja4g0373 Lja-Chr4 2986837 2991924 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja4g0373 K07052 - gmx:100816897 553.903
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja4g0373 4 2986837 2991924 Lja4g0373 4 2986837 2991924 ECH