Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja4g0353 ATGAGGATCGATAATTTCAACCACAAAAGCTTCCTCCTCAAGTTGCTTCTTACCGTCTTCTTCTTCGGCCTCGCTTTCCGACTCTTCTTCTTCCATTCCCTCCCCTCTCTCATTTCTCCACTTCTCGAAACCCCATTTCCCGAGAAAGATGCCATACCCGAAAATCCACCTCAAACTTCGTCTTCTTCAGAACCAGTTCCCCAATTGACACCTGCTCCAGTTCCTATTCATATTCCTGAAGATGAGGAAGATCAAGTGGCTCCAACAGAAACAGGGAAATGTGATTATTTCATTGGGGATTGGGTTCCAAACCCGCTGGGTCCGGCTTATACTAATGAAAGCTGCAATCTCATTGAGTCTCATCAAAATTGCATGACTAATGGGAGGCCCGACAGGGAGTTTTTGAATTGGAGGTGGGTTCCGAGAGACTGCGATTTGCCTCAGTTTGATCCGTGGAGGTTTCTTCGCATGATGCGTAATAAGGCGTGGGCACTCATTGGTGATTCCATATCGCGCAACCATGTTCAGTCCTTGCTCTGCATGCTTGCAAAGGTGGAACAACCTGCTTTAGTCTACCATGATGAGGAATACAAGTCCCGAAGCTGGCACTTTCCGTTATCCAACTTAACTATATCGGTTATTTGGTCACCATTCCTTATGGAAGCTGCTATTTTTGAAGACATTAATGGTGTTTCAAGTTCTGAAATTCAGTTATATCTTGACAAGCTAGACAGTAAATGGACGAATCAGTACTTGAACTTTGATTACATTATTATTTCAACTGGGAAATGGTTTGTCAAGTCTGCAATCTACTATGAAAATGACACTATATTGGGCTGCCATGGCTGTTCTAACAAGAACTTGACAGATCTGGGGTTTGACTTTGCTTATCGCAAAACCTTGAGATTTGTCATGAACTCCATATTGTCTTCCAACCACAAAGGTTTGATTTTTTTCAGGACATCCACACCTGACCATTTTGAAAATGGGGAGTGGTTTAGTGGGGGAACTTGCAATAGAACAGCACCAATTAAAGAAGGTGAGATGGAAATGAAGGATTTGAGCCGGATTCTTCGCGAGGTTGAGTTAGAGGAGTTTGGAAATACAACTTCTGAAGCTTCAAGATATGGAGTGAATGTCAAAATTCTTGATTTTGCACCACTTATGCTTTTGAGACCAGATGGGCATCCTGGTCCATACAGGCAATTTCATCCATTTGCAGAGGGGCCAAATGCTAAAGCTCAAAGGGATTGTCTGCACTGGTGCTTACCTGGGCCAATAGACTCTTGGAATGACATAATAATGGAGATGATTGTCAATGGATAA 1326 0.4299 MRIDNFNHKSFLLKLLLTVFFFGLAFRLFFFHSLPSLISPLLETPFPEKDAIPENPPQTSSSSEPVPQLTPAPVPIHIPEDEEDQVAPTETGKCDYFIGDWVPNPLGPAYTNESCNLIESHQNCMTNGRPDREFLNWRWVPRDCDLPQFDPWRFLRMMRNKAWALIGDSISRNHVQSLLCMLAKVEQPALVYHDEEYKSRSWHFPLSNLTISVIWSPFLMEAAIFEDINGVSSSEIQLYLDKLDSKWTNQYLNFDYIIISTGKWFVKSAIYYENDTILGCHGCSNKNLTDLGFDFAYRKTLRFVMNSILSSNHKGLIFFRTSTPDHFENGEWFSGGTCNRTAPIKEGEMEMKDLSRILREVELEEFGNTTSEASRYGVNVKILDFAPLMLLRPDGHPGPYRQFHPFAEGPNAKAQRDCLHWCLPGPIDSWNDIIMEMIVNG* 442
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja4g0353 441 MobiDBLite consensus disorder prediction 48 87 - -
Lja4g0353 441 Pfam PMR5 N terminal Domain 93 145 IPR025846 -
Lja4g0353 441 PANTHER PROTEIN TRICHOME BIREFRINGENCE-LIKE 24 5 440 - -
Lja4g0353 441 Coils Coil 344 364 - -
Lja4g0353 441 Pfam GDSL/SGNH-like Acyl-Esterase family found in Pmr5 and Cas1p 146 437 IPR026057 GO:0016740
Lja4g0353 441 PANTHER PROTEIN TRICHOME BIREFRINGENCE-LIKE 9-RELATED 5 440 IPR029962 GO:0016413
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja4g0353 Lja-Chr4 2818864 2823968 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja4g0353 - - gmx:100816814 698.353
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja4g0353 4 2818864 2823968 Lja4g0353 4 2818864 2823968 ECH