Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja4g0351 ATGGCGCGTCCACCAAAGGACGTTCCCTTGCCGGAGGAGGACGCCGGAGCAGCCTTCGTCCTCCAATCCAAAGGTCAATGGTGGCACGCGGGTTTTCATTTAACCACGGCGATTGTTGGCCCAACGATACTCACGCTGCCGTACGCTTTCAGAGGATTGGGGTGGGTGCTTGGGTTCGTTTGCCTCACCGTGATGGGCGCTGTCACGTTCTACGCTTACTTCCTCATGTCCAAGGTGCTCGAACACTGTGAGAAATCCGGTCGCCGCCACATCCGTTTCCGGGAGCTTGCCGCCGACGTCTTAGGTTCGGGATGGATGTACTATTTTGTAATCTTCATCCAAACGGCAATCAACACTGGAGTTGGCATAGGGGCAATCTTGCTCGCTGGGGAATGCCTTCAGATCATGTACTCCAACATTTCACCTCATGGATCCCTGAAATTGTACGAGTTTATAGCAATGGTGACAGTGGTAATGATATTTTTATCCCAACTTCCCTCTTTCCATTCCCTGCGACACATCAACTTGTGTTCACTCTTCCTTGCATTGGGCTACACCATGCTTGTGGTCGGTGCGTGTATTCATGCAGGAAAATCAGAAAATGCCCCTCCAAGGGACTATTCCTTAGAACCTAAGAAGTCTGCAAGGGCCTTAAGCGCCTTCACCTCTATCTCCATACTCGCAGCAATATTTGGGAATGGCATATTACCCGAGATACAAGCAACTCTAGCACCCCCTGCCACAGGGAAGATGGTAAAAGGCCTTGCTATGTGTTATGCTGTGATTTTTGTGACTTTCTACTCTGCTTCAGTTTCTGGATATTGGGCATTTGGAAACAAGGCCAGCTCAAACATTTTAAATAGTCTGCTGCCAGATAATGAACCTGCCTTGGTTCCAACTTGGGTCCTTGGACTTGCTGTCATCTTTGTTCTTCTTCAGCTCTTAGCAATTGGCCTGGTTTATTCTCAAGTTGCTTATGAGATAATGGAGAAGAAATCAGCAGATGTTAAGCAGGGGATGTTTTCCAAAAGAAATCTTATTCCTCGCCTTGTTCTTCGATCAATTTACATGATATTCTGTGGGTTCATGGCAGCCATGTTACCATTTTTTGGCGACATCAACGGTGTGATTGGTGCTATTGGTTTCATCCCTCTGGATTTCATCCTGCCTATGCTTCTGTACAACATGACTCACAAGCCACCAAAATCATCCTTAACTTATTGGGTCAACATGTCCATTATGGTGGTGTTCACGGGTGCAGGAATCGTGGGTGCATTCTCTTCCATAAGGCAATTGGTTCTTGATGCCAACCAATTTAAGCTATTTAGCAGTGATGTTAAGGATTAA 1347 0.4692 MARPPKDVPLPEEDAGAAFVLQSKGQWWHAGFHLTTAIVGPTILTLPYAFRGLGWVLGFVCLTVMGAVTFYAYFLMSKVLEHCEKSGRRHIRFRELAADVLGSGWMYYFVIFIQTAINTGVGIGAILLAGECLQIMYSNISPHGSLKLYEFIAMVTVVMIFLSQLPSFHSLRHINLCSLFLALGYTMLVVGACIHAGKSENAPPRDYSLEPKKSARALSAFTSISILAAIFGNGILPEIQATLAPPATGKMVKGLAMCYAVIFVTFYSASVSGYWAFGNKASSNILNSLLPDNEPALVPTWVLGLAVIFVLLQLLAIGLVYSQVAYEIMEKKSADVKQGMFSKRNLIPRLVLRSIYMIFCGFMAAMLPFFGDINGVIGAIGFIPLDFILPMLLYNMTHKPPKSSLTYWVNMSIMVVFTGAGIVGAFSSIRQLVLDANQFKLFSSDVKD* 449
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja4g0351 448 PANTHER GABA TRANSPORTER 2 ISOFORM X1-RELATED 4 442 - -
Lja4g0351 448 Pfam Transmembrane amino acid transporter protein 24 432 IPR013057 -
Lja4g0351 448 PANTHER OS05G0424000 PROTEIN-RELATED 4 442 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja4g0351 Lja-Chr4 2806971 2813291 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja4g0351 1 448 Organic Solute Cotransporters AT5G41800 78.097 0.0 734
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja4g0351 - - gmx:100815232 800.816
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja4g0351 4 2806971 2813291 Lja4g0351 4 2806971 2813291 ECH