Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja4g0342 ATGATGAACAGCGAAAGCGGATTGATTAAGCTCTGCATCGATGCGGCGTGTGACAGCAAAGAAAGCATCGACAGATGGCGCCTACAGAAACGCTCTCTCGATCGCTTGCCTTCTCCTCTCGCCGACGCTCTCATCCGCCGCCTCCTCAGTCGCACTCTCCTCCGCCCCTCCCTCCTCGAGGTTTTCAAACGCAGTGCCGAAGAGGTTGATCTGAGAGGCGAAAACCATGTCGATGCACAGTGGATGGCATATTTAGGAGCATTTCGCTACCTGCGCTACTTGAACGTTGCCGATTGCCATCGAATCACCAATTCAGCTCTTTGGCCTCTCACAGGAATGACTAGCTTGAAGGAGTTGGATCTCTCTAGATGCTCCAAGGTTGATGATGGTGCAATTGACCATATTCTTTCAATTCCTAATTTGGAGAAGTTGCACATTTCAGAAACAAGTGTGACTGCCAAAGGGGTCAAGCTTCTCGCCTCTCTTGGGAACTTGTCTCATCTTGATTTGGGAGGCTTGCCTGTGGATGACATCACATTAACTTCGTTACAGGTGCTGAAGAAGCTACAATATATTGATCTCTGGGGTAGTGAAATATCAAATGAAGGTGCTGTTGTTCTTAATCTATTTCCGAGGTTAACCCATCTAAATCTTGCTTGGACGAATGTGACAAAATTGCCTAATTTATCATCTCTTGAGTTCCTGAACATGAGTAATTGTACTATCGACTCTATACTTCAAGATGGCAAATCTCCGTTGGCAAAGCTTATTCTCTCTGGGACTACATTCCTGAATGAAGCTGAAGCCTTATTACATATAAATACAAATTTTCTGTCCTATCTGGATGTAGCCCACTCTGGCCTTCACAGATTCTTCTTCTTAAGTAAAATGAAAGTAATAGAACATCTTAATCTCAGCTCGTGTATGAGCGATGATTCAGTTGAGATGGTCGCATGCATTGGTGGAAACTTGAAAAGTCTGAATCTGAGTTGTACTGCAGTCAGCTCTGCTGGACTAGGGGTTTTAGCTGGACATGTGCCCAATCTTGAAATTCTGTCTCTCTCTCAGACACCAGTGGATGATACTGCCATCCCATTTATAGGCATGATGCCTTCATTGAAGGTGGTTGACCTGAGCAAGACAAACATTACAGGTTTTTTGCCCCAGGGGGACAGGGACATCTCATTCTCTCTGACGGCTCTACAGGACCTTAAACAATTAGAAAGCTTGAATATGGAAGGCACACCAGTTGGGGGCTCAGCTTTGTACCCTTTATCAAGTTTCCAAGAGCTGAGATGCTTATCTCTTGAAAGTGCTTCACTCGCAGACATCACACTTTTCTATATATCATCAATTCCTAAGTTGACAAATCTTAGTATCTTGGATGCACTATTGACAAATTATGGGCTTGATATGTTTGAGGCTCCTGAAACTCTGAAATTGCTGGATATCAGAGGTTGTTGGCTCTTAACTAAAGACACTATATTGTCATTCTGCAGAAATTATCCACAAATTGAAGTAAGGCATGAACTTCTTACTCTGCCTCCTTTCGAGGAAAATGCACTTCATTATTCCTCTCCATCTCAATCAACTTCAAGGACTCAGCAATCTGCCAAGAAGAAAGAGCATTCCTCTCCGTCTCAATTAACTTCAAGGACTATGCAAGCATCTAAGACGAAAGAGGGAATATCCATATCTCCGTGTTTTATAGATCAAAGGTTGAAGTATAGCAGAGATGAGTTACTCGCATTGCAATTTTCATCTTTACCTTTTGCATCCAGTAGTGAGAGTGACAATTCAATTTTTGAGAAGCAATTGGATTGA 1824 0.4304 MMNSESGLIKLCIDAACDSKESIDRWRLQKRSLDRLPSPLADALIRRLLSRTLLRPSLLEVFKRSAEEVDLRGENHVDAQWMAYLGAFRYLRYLNVADCHRITNSALWPLTGMTSLKELDLSRCSKVDDGAIDHILSIPNLEKLHISETSVTAKGVKLLASLGNLSHLDLGGLPVDDITLTSLQVLKKLQYIDLWGSEISNEGAVVLNLFPRLTHLNLAWTNVTKLPNLSSLEFLNMSNCTIDSILQDGKSPLAKLILSGTTFLNEAEALLHINTNFLSYLDVAHSGLHRFFFLSKMKVIEHLNLSSCMSDDSVEMVACIGGNLKSLNLSCTAVSSAGLGVLAGHVPNLEILSLSQTPVDDTAIPFIGMMPSLKVVDLSKTNITGFLPQGDRDISFSLTALQDLKQLESLNMEGTPVGGSALYPLSSFQELRCLSLESASLADITLFYISSIPKLTNLSILDALLTNYGLDMFEAPETLKLLDIRGCWLLTKDTILSFCRNYPQIEVRHELLTLPPFEENALHYSSPSQSTSRTQQSAKKKEHSSPSQLTSRTMQASKTKEGISISPCFIDQRLKYSRDELLALQFSSLPFASSSESDNSIFEKQLD* 608
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja4g0342 607 Gene3D Ribonuclease Inhibitor 363 576 IPR032675 -
Lja4g0342 607 ProSiteProfiles Leucine-rich repeat profile. 212 233 IPR001611 GO:0005515
Lja4g0342 607 PANTHER RECEPTOR-LIKE PROTEIN 14 2 601 - -
Lja4g0342 607 PANTHER F-BOX/LRR-REPEAT PROTEIN 13 2 601 - -
Lja4g0342 607 SMART LRR_CC_2 114 138 IPR006553 -
Lja4g0342 607 SMART LRR_CC_2 162 186 IPR006553 -
Lja4g0342 607 SMART LRR_CC_2 88 113 IPR006553 -
Lja4g0342 607 SMART LRR_CC_2 321 345 IPR006553 -
Lja4g0342 607 SMART LRR_CC_2 476 501 IPR006553 -
Lja4g0342 607 Gene3D Ribonuclease Inhibitor 152 257 IPR032675 -
Lja4g0342 607 SUPERFAMILY RNI-like 109 496 - -
Lja4g0342 607 MobiDBLite consensus disorder prediction 523 560 - -
Lja4g0342 607 Gene3D Ribonuclease Inhibitor 265 362 IPR032675 -
Lja4g0342 607 Gene3D Ribonuclease Inhibitor 54 150 IPR032675 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja4g0342 - - gmx:100814174 852.432
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja4g0342 4 2733947 2738607 Lja4g0342 4 2733947 2738607 ECH