Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja4g0341 ATGGCGGAAGAAAGATTCATCGTTGAGGTGGAGAAAGCGAAAGATGGCGGAGAAGGGAAGCCATCCATGGGCCCTGTGTACCGTAGCATCATATCCAAGGATCCTGTTCCTCCTCCCATCCCTGGTCTTGATACCTGTTGGGACATTTTCAGGCTGGCAGTTGAGAAGTATCCGACAAAACCAATGCTTGGTCGCCGGGAAATCGTGAATGGAAATCCTGGCAATTACAAGTGGCAAACTTACAAAGAGGTGTATGATTTGGTGGTGAATGTTGGAAATTCTATTCGTGCTTGTGGTCATGGATATGGAGTAAAATGTGGTATTTATGGTGCCAATTGCGCAGAATGGGTTATGAGCATGGAGGCCTGCAATGCTCATGGATTGTACTGTGTTCCTTTATATGATACGTTAGGTGCTGGGGCTGTTGAATTTATTATATGCCATGCAGAGATCTCAATTGCATTTGTGGAAGAAAAGAAGATTCCTGAGCTATTCAAGACATTTCCAAATGCAACAAAGCATCTCAAGACACTTGTGAGCTTCAGAAAGGTTACTCCTGAACAAAGGGAAGAAGTTGAGAAGTTTGGGTTGACAATATATTCATGGGATGAATTTTTAGAAGTGGGTCGTAATCAGAGTTTTGATCTTCCTACTAAAAAGAGAAGTGACATTTGTACAATAATGTATACGAGTGGAACTACAGGGGATCCCAAGGGAGTAATGATATCAAATGAGAGCATTATTACAATCTTAGCTGGGATTAATGCAGTGTTGGGGAGTCGTAATGAACAACTGAATGAGAAAGATGTATACCTATCATACCTTCCTCTTGCACACATTTTTGATAGGGTCATTGAGGAGGCAATGATATTGAATGGTGCTTCAATAGGCTTTTGGCGTGGGGATGTCAAATTGCTATTGGAAGACATTGCAGAGCTAAAACCAACAATTTTTGTTGCTGTTCCCCGTGTGCTTGATAGAGTGCACTCAGGTTTGACACAAAGGATTTCTTCAGGGGGCTTTGTAAAACAGACAATGTTCAATTTTGCCTACACATTCAAGTCATATAACATGATGAAGAGAGGGCAAACACATCGAGAAGCATCTCCACTATTTGACAAAATTGTATTTAGTAAGGTAAAACAAGCTTTAGGGGGAAATGTACGTATTATTTTGTCTGGAGCAGCACCTCTCTCCAAACATGTGGAAAGTTTCCTGCGGGTGGTGACTTGTGCTCATATTCTACAAGGATTTGGTCTAACTGAAACCTGCGCTGGAACCTTTGTCTCATTGCCAAATGAACCAAATATGCTTGGTACAGTGGGCCCTCCTGTACCATATGTGGATGTGTGCCTGGAATCTGTTCCTGAAATGGGATATGATGCCCTTGCAAGCACACCGAGAGGTGAAATCTGTGTAAGGGGAAGTACCCTGTTTTCAGGGTACTACAAACGTGAAGACCTCATGAAAGAGGCTATGGTTGATGGATGGTTCCATACAGGCGATATTGGAGAATGGCAACCTAACGGAACCATGAAAATTATTGATCGGAAGAAGAATATATTTAAGCTTTCACAAGGAGAATATGTTGCTGTTGAAAACCTGGAGAATATTTATGTTCAAGTGTCGGCCATTGAATCTATATGGATCTATGGAAGCAGTTTTGAGTCCTTCCTTGTTGCTGTTATTAACCCCACCAAGCAAGCACTTGAGCTTTGGGCAGAGGAAAATGGTATAACCGGGGACTTCAACTCTCTCTGTGAAGATTCTAGGGCAAAAAGTTACATACTCGGAGAGCTCTCGAAGATTGCTAAGGAAAAGAAGTTGAAAGGTTTTGAGTTTATAAGAGCTGTTCATCTTGACCCGGTTCCATTTGACATGGAACATGACCTTATCACACCAACGTATAAGAAGAAGAGACCCCAGTTGCTTAAATACTATCAGAATGTCGTTGATGAAATGTACAAGACAGGAAATAAACCAAGTGCCTGA 1992 0.4187 MAEERFIVEVEKAKDGGEGKPSMGPVYRSIISKDPVPPPIPGLDTCWDIFRLAVEKYPTKPMLGRREIVNGNPGNYKWQTYKEVYDLVVNVGNSIRACGHGYGVKCGIYGANCAEWVMSMEACNAHGLYCVPLYDTLGAGAVEFIICHAEISIAFVEEKKIPELFKTFPNATKHLKTLVSFRKVTPEQREEVEKFGLTIYSWDEFLEVGRNQSFDLPTKKRSDICTIMYTSGTTGDPKGVMISNESIITILAGINAVLGSRNEQLNEKDVYLSYLPLAHIFDRVIEEAMILNGASIGFWRGDVKLLLEDIAELKPTIFVAVPRVLDRVHSGLTQRISSGGFVKQTMFNFAYTFKSYNMMKRGQTHREASPLFDKIVFSKVKQALGGNVRIILSGAAPLSKHVESFLRVVTCAHILQGFGLTETCAGTFVSLPNEPNMLGTVGPPVPYVDVCLESVPEMGYDALASTPRGEICVRGSTLFSGYYKREDLMKEAMVDGWFHTGDIGEWQPNGTMKIIDRKKNIFKLSQGEYVAVENLENIYVQVSAIESIWIYGSSFESFLVAVINPTKQALELWAEENGITGDFNSLCEDSRAKSYILGELSKIAKEKKLKGFEFIRAVHLDPVPFDMEHDLITPTYKKKRPQLLKYYQNVVDEMYKTGNKPSA* 664
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja4g0341 663 ProSitePatterns Putative AMP-binding domain signature. 227 238 IPR020845 -
Lja4g0341 663 Gene3D - 43 517 IPR042099 -
Lja4g0341 663 PANTHER LONG CHAIN ACYL-COA SYNTHETASE 4-LIKE 5 657 - -
Lja4g0341 663 Pfam AMP-binding enzyme 53 525 IPR000873 -
Lja4g0341 663 PANTHER LONG-CHAIN-FATTY-ACID--COA LIGASE 5 657 - -
Lja4g0341 663 SUPERFAMILY Acetyl-CoA synthetase-like 42 657 - -
Lja4g0341 663 CDD LC-FACS_euk 74 656 IPR045311 GO:0004467|GO:0006631
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja4g0341 Lja-Chr4 2725057 2732095 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja4g0341 3 663 Acyl Lipid Metabolism Gene Families AT4G23850 71.256 0.0 1028
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja4g0341 K01897 - gmx:100811306 1153.27
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja4g0341 4 2725057 2732095 Lja4g0341 4 2725057 2732095 ECH