Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja4g0333 ATGACTCTCAACTTGTCCACTCCTTCCTTCTCTCGTTTACTTCCTCATCATCACCCTTCTTCTTCTGTTCTCCCCAAATTCTCTCACAACGCTTTCCCCACTCTCTCCTTCCCCGCTTTCTCTCTTCCCAACTCGCCGAGATTTCTCAACGCCAAAGCCTCCGTCAGCGAGAGCCGGAATGAAACCTCCGATGACCACACCGTTTCCGCCTCCGACCAGCAACTCCTGCTACGAATTTCTGCCACCGCTAAAGACGCCGACGAGGCCTTGCAGATGATCGCTGACAACGCTGAAACAAACTCAGGAGGTGGTGTCGTTTCCACCTCTGATTGTTGCTCCATTATATCCGCCGCTCTTAGCCGGAATAATCCCCAGCTTGCCTTGTCTGTTTTCTACGCCATGCGCGCCAGTTTTCGTCAAGTTGACGAGAATGGTCCTTTAGTTGAGAGATGGAAGTGGCCGAGGCCTAATGCGAATGTTTACACGGTGTTGATTAACGGTTTGGCGGCATCCTTGAGGGTTTCGGATGCTCTAAGCGTGATCAAATACATATGTGAGGTGGGCGTGTCTCCTGGTGAGGAGGTCCCTTTTGGGAAGATAGTGAGATGTCCTAGTTGTAGGATAGCTGTTGCTGTTGCACAGCCACAGCAAGGTATTCAGATAGTATCGTGTGCAAAGTGTCGCTACCAATATGAACTTGTCTCGGGTGACATAGTCAGTATTCAATCAGAAGAAATCAGCATGGACATTACAGCATGGGAAAGGGGGTTAAGATTCCTCAAGTTGATGAAGCAAAGTATTCCTTCTGCCGTTCACTCTATTGTGGTGCAGACCCCTTCTGGTGTGGCACGCACTCACAGATTTGCAACTGAAACGGTTGATCTGCCAGCTCAGGCAGGTGAAAGGGTAAGTGTTGCTGTGGCAGCTCCATCAAATGTATACAGAAAGGTGGGTCCCTTTAAATTTAGTCCAAGGGCCCCGGATTTTTATCCTGGTGAGGCTATGTGCATAACAAACCACAAAGATGGGCGGGAATCACTTCTGTTAAGAGCCCCGAGAAAAGAAGAAAATTCATCATTACTTAAACCCTCCCTCCTCTTTCCACTTCTTGCTGTGTTTGCCACTGGTGATGCTGCCTCTGGACTTATTGACCCCAGCCTACCTCAGTTGCTATCAATTGTTGCAGTTTCATCTCTTGCTGTTGGATCTACTTTGAACTCCTTTGTTCTTCCCCAGTTAAATCAGCTTCCGCAAAGGTCGGTAGAAACAACTGCTGTCAAACAACAACTTTTATCTCAATATGATGTGCTTCAGTCTCGCATCAATGGCCTAAAAGAAGCTGCTGAAAAAGAGATTTGGATGTTGGCTCGAATGTGCCAGCTTGAGAATAAAATTTCAGCTGTTGGAGAACCTTCTTATAGGACACGGATAAGTAAAGTCAAGAGAGTCCGAGAGAGCCTGCAGAACTCCCTCCAGGGAAGAATTGAATTGATTGCTAGCTATGCTAGGATTTCCTCAATGATTGAAATTGAAGTGGAGATGGAAACCGATGTTCTTGCTGCTGAAACTGCCAGCGATGTGGATAGTATTACAGAACAAATAGAGCAAATCATGGAGCTCGAAAATTTGGAGGAGAGATGGAAAATGCAAGCAGAAGCCAGTGATGAAGCTGAAAGACTTCTTAGTTCCCAATCCATGCCTTCTGAGGAAGTTTGA 1716 0.4691 MTLNLSTPSFSRLLPHHHPSSSVLPKFSHNAFPTLSFPAFSLPNSPRFLNAKASVSESRNETSDDHTVSASDQQLLLRISATAKDADEALQMIADNAETNSGGGVVSTSDCCSIISAALSRNNPQLALSVFYAMRASFRQVDENGPLVERWKWPRPNANVYTVLINGLAASLRVSDALSVIKYICEVGVSPGEEVPFGKIVRCPSCRIAVAVAQPQQGIQIVSCAKCRYQYELVSGDIVSIQSEEISMDITAWERGLRFLKLMKQSIPSAVHSIVVQTPSGVARTHRFATETVDLPAQAGERVSVAVAAPSNVYRKVGPFKFSPRAPDFYPGEAMCITNHKDGRESLLLRAPRKEENSSLLKPSLLFPLLAVFATGDAASGLIDPSLPQLLSIVAVSSLAVGSTLNSFVLPQLNQLPQRSVETTAVKQQLLSQYDVLQSRINGLKEAAEKEIWMLARMCQLENKISAVGEPSYRTRISKVKRVRESLQNSLQGRIELIASYARISSMIEIEVEMETDVLAAETASDVDSITEQIEQIMELENLEERWKMQAEASDEAERLLSSQSMPSEEV* 572
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja4g0333 571 Coils Coil 427 447 - -
Lja4g0333 571 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 157 191 IPR002885 -
Lja4g0333 571 PANTHER PENTATRICOPEPTIDE REPEAT (PPR) SUPERFAMILY PROTEIN 1 570 - -
Lja4g0333 571 Coils Coil 530 560 - -
Lja4g0333 571 Gene3D Tetratricopeptide repeat domain 68 203 IPR011990 GO:0005515
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja4g0333 - - gmx:100781803 889.797
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja4g0333 4 2684839 2690220 Lja4g0333 4 2684839 2690220 ECH