Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja4g0332 ATGGCAACCCAAACCGTTCTCGTTACCGGCGGTGCCGGTTACATCGGCAGCCACACCGTCCTCCAGCTTCTGCTCGGCGGTTTCAACGCCGTCGTCGTTGATAACCTCGACAATTCCTCCGAAGCCGCTATCCATAGAGTCAAGGACCTCGCCGGAGAATTCGCCGGTAACCTTTCCTTTCACAAGTTGGACCTCCGTGACAGAGATGCACTGGAGAAGGTTTTTGCTTCTACAAAGTTTGATGCTGTCATACATTTTGCTGGACTGAAAGCAGTCGGTGAAAGTGTGCAGAAACCGCTGCTTTACTATGACAACAACTTGATTGGGACAATTGTTCTACTTGAAGTCATGGCTGCCCATGGATGCAAGAAGCTTGTGTTCTCATCTTCGGCCACTGTATATGGATGGCCTAAGGAGGTCCCGTGTACTGAAGAGTTCCCTTTGTCAGCAGCAAATCCATATGGACGAACCAAGCTTATCATCGAGGAAATTTGTCGGGATATCTACCGTGCAGAAGAGGAATGGAAAATTATACTGCTGAGATACTTTAATCCTGTTGGTGCACATCCTAGTGGTAATATTGGCGAGGATCCTCGTGGAATTCCAAACAACCTCATGCCATTTGTTCAGCAAGTAGCAGTTGGCAGACGTCCTGCATTGACAGTTTTTGGAACAGATTATAGTACAAGTGATGGCACTGGAGTTCGCGATTACATTCATGTTGTTGATTTAGCAGATGGGCACATAGCTGCATTGCATAAACTAGATGATCCTAAAATAGGCTGTGAGGTTTATAACTTGGGAACAGGAAAGGGAACATCAGTTTTGGAGATGGTTAAAGCTTTTGAACAGGCCTCTGGAAAGAAAATTCCACTTGTAACGGCTGATCGGAGACCTGGAGATGCTGAAATTGTTTATGCATCAACTGAAAAAGCAGAAAGAGAACTGAACTGGAAGGCTAAATATGGAATCGATGAAATGTGTCGTGATCAATGGAACTGGGCTAGCAAAAACCCTTATGGCTATGGAGGATCTGAAGATTCTTCTAATTAA 1053 0.4539 MATQTVLVTGGAGYIGSHTVLQLLLGGFNAVVVDNLDNSSEAAIHRVKDLAGEFAGNLSFHKLDLRDRDALEKVFASTKFDAVIHFAGLKAVGESVQKPLLYYDNNLIGTIVLLEVMAAHGCKKLVFSSSATVYGWPKEVPCTEEFPLSAANPYGRTKLIIEEICRDIYRAEEEWKIILLRYFNPVGAHPSGNIGEDPRGIPNNLMPFVQQVAVGRRPALTVFGTDYSTSDGTGVRDYIHVVDLADGHIAALHKLDDPKIGCEVYNLGTGKGTSVLEMVKAFEQASGKKIPLVTADRRPGDAEIVYASTEKAERELNWKAKYGIDEMCRDQWNWASKNPYGYGGSEDSSN* 351
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja4g0332 350 PANTHER UDP-GLUCOSE 4-EPIMERASE 1 346 - -
Lja4g0332 350 PANTHER UDP-GLUCOSE 4-EPIMERASE 5 1 346 - -
Lja4g0332 350 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 1 341 IPR036291 -
Lja4g0332 350 CDD UDP_G4E_1_SDR_e 5 334 IPR005886 GO:0003978|GO:0006012
Lja4g0332 350 TIGRFAM galE: UDP-glucose 4-epimerase GalE 6 340 IPR005886 GO:0003978|GO:0006012
Lja4g0332 350 Pfam GDP-mannose 4,6 dehydratase 7 330 IPR016040 -
Lja4g0332 350 Gene3D - 6 275 - -
Lja4g0332 350 Gene3D - 194 335 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja4g0332 Lja-Chr4 2676397 2680045 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja4g0332 5 319 Miscellaneous Gene Families AT4G00110 27.628 2.79e-21 92.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja4g0332 K01784 - gmx:100792137 636.336
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja4g0332 4 2676397 2680045 Lja4g0332 4 2676397 2680045 ECH