Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja4g0323 ATGGAGATTTTCTCTGCCTTATCGGAACCCTTCCTCGTCGCCGTTATCGTAACCGCTCTCTGCTTCTTCCTCGCACTCTTCTCTCTTCTCCGCCCATTCTCCTTCCCCTCTTCTCTCAGGAAGAAATCCACTCCGCCCAGAAAACACTGCGATTGCGCCCTTTCCGATTCCGCTGCTGCCGTGCCCTACTTGAACGGCGGTTCCGCTGAAATGCTGGAGGCGAGCCACGCTCCGGTGGCGCCTGTCGTGTTGGCTGAGCGACGGACGGGGTCGTCGATGATGGAGGAATTGGTTCCGGAGATTACGACGCATGCGTTGAGTTACTTGGATTATCCCAGCTTGTGTCGGCTTTCGATGACCAATTCGTTGATGCGGAAGGCTGCTAATGATGATAATGCCTGGAAGGCCCTTTATCACAAGGACTTCACCTGGGAACAAGATAGTATTACTCCAGTGAATGGGTGGAAGGCATACTATGCTGCAACAAGAGCAATTGTGAATATTAATACAGAATTCTTCAACATCATCAGAGATAAGTCTATTCCAGCAATGAGTCGTTTTTGGCTAAATGCGGATTACGTAAAGTGCATTCATGCCTCGGGAGAACTCTTTTCAGGGTATAACGCGGTAATGCAGAGTTGGCAGCTTGTATTCAACTGGGAGCAAGGATTGAACTTTCAGGTTCGGGATGTACGTGCTCGAGTGTTGACTGACATGGCTTGGGTTACTATGAAAACATTTGTTGACATGGACACAGGGCCATTCAACGTAACCAATGTCTTTGAGTTCCATAATGGACGGTGGTATATGGTTCATCATCACAGCTCTGTGATGAATGGGGAGGTGGATCAATAA 855 0.4889 MEIFSALSEPFLVAVIVTALCFFLALFSLLRPFSFPSSLRKKSTPPRKHCDCALSDSAAAVPYLNGGSAEMLEASHAPVAPVVLAERRTGSSMMEELVPEITTHALSYLDYPSLCRLSMTNSLMRKAANDDNAWKALYHKDFTWEQDSITPVNGWKAYYAATRAIVNINTEFFNIIRDKSIPAMSRFWLNADYVKCIHASGELFSGYNAVMQSWQLVFNWEQGLNFQVRDVRARVLTDMAWVTMKTFVDMDTGPFNVTNVFEFHNGRWYMVHHHSSVMNGEVDQ* 285
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja4g0323 284 Pfam SnoaL-like domain 166 279 IPR037401 -
Lja4g0323 284 PANTHER F-BOX PROTEIN SKIP8 1 283 IPR044260 -
Lja4g0323 284 SUPERFAMILY NTF2-like 160 278 IPR032710 -
Lja4g0323 284 Gene3D - 83 163 - -
Lja4g0323 284 Gene3D - 164 284 - -
Lja4g0323 284 ProSiteProfiles F-box domain profile. 91 137 IPR001810 GO:0005515
Lja4g0323 284 SUPERFAMILY F-box domain 89 175 IPR036047 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja4g0323 Lja-Chr4 2588468 2592227 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja4g0323 - - gmx:100807571 472.626
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja4g0323 4 2588468 2592227 Lja4g0323 4 2588468 2592227 ECH