Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja4g0319 ATGGGGTGTGCCTCCTCCAAGGGTATCGACGCCACAGCAGCGGTGTACCGCCCACCTCCGACGAGCTTCGCGGTGTTCGACATCAACTCCATCGAGGAGCCATGGCTGAAACACCTCAACAACACCGCCACCGACCCACTTCACACCCAAGACACAAAACAACCCTCACTCCCTGCCCCTATCCTCCACCTCCTGGAAAAAGCCACCGAAGCCCCTCAATCCTGGGACGAAGTTAGCAAGGTCCTCCATGACCTCAAACCCATCGTTGAACAACCACCACAACCACCGCAATCGCAACCACAACCACCCTCCACACCACCACCACAGAACCAATCTCAACCCTTACGCAAGAATGCCTCCTTCCACACACTGGAAGAGTTAGACGCGAAATCAACCCCGAACGCTAAACCAGAGTTGAAGAAATCACCAATTGAGACAAGCAAGAAGAACAGTGAGGTTGAAGAAGAGAATCGAATCAAATTGATCAAAACCTCGAGCAAATTGAAGGACAACATCTTCATAAAGAGAGACATGGAAGAGCGGAAGAAGGAAGAGAGCGAATCGGTTTACGAGAGGCTTCGGCGGGACCCGCTGAGCCAGTTCCCGGAGAAATCCCCGCCGGGAGGCGCCGACGCGGTGGTGATTTACACGACGTCGTTGCGTGGAGTGAGGAAGACGTTCGAGGATTGCAACCGGGCGAGGGAGGTGCTGGAGGGGCATAGAGTGGTGGTGGACGAGCGTGACGTGGCGCTCCACTCCGGGTTTCTGAAAGAGGTGAAGGAGCTGCTGGCGGAGGAGGTGGTGGTGGCGGTGGCGCCGCTGCCGAGGGTGTTTGTGAAGGGGAGGTATTTGGGCGGGTTGGAGGAGTTGGTGGAGCTGAATGAGTCGGGTCGGTTGGGTCGGATCTTGAATGCGACACGTGTGGAGAGAGGGGTAGGGAGATATGGTTGTGATGGGTGTGGTGGGGCCAGGTTTGTGCCTTGTTTGGATTGTGGTGGAAGTTGCAAGTTGGTGTTGAGTGATGTGAATCAGATTGAGAGGTGTCCTAAGTGTAATGAGAATGGGTTAGTGCATTGCCCTGCTTGTGCTTAA 1092 0.5513 MGCASSKGIDATAAVYRPPPTSFAVFDINSIEEPWLKHLNNTATDPLHTQDTKQPSLPAPILHLLEKATEAPQSWDEVSKVLHDLKPIVEQPPQPPQSQPQPPSTPPPQNQSQPLRKNASFHTLEELDAKSTPNAKPELKKSPIETSKKNSEVEEENRIKLIKTSSKLKDNIFIKRDMEERKKEESESVYERLRRDPLSQFPEKSPPGGADAVVIYTTSLRGVRKTFEDCNRAREVLEGHRVVVDERDVALHSGFLKEVKELLAEEVVVAVAPLPRVFVKGRYLGGLEELVELNESGRLGRILNATRVERGVGRYGCDGCGGARFVPCLDCGGSCKLVLSDVNQIERCPKCNENGLVHCPACA* 364
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja4g0319 363 MobiDBLite consensus disorder prediction 180 208 - -
Lja4g0319 363 MobiDBLite consensus disorder prediction 121 157 - -
Lja4g0319 363 Gene3D Glutaredoxin 211 310 - -
Lja4g0319 363 MobiDBLite consensus disorder prediction 180 199 - -
Lja4g0319 363 MobiDBLite consensus disorder prediction 81 157 - -
Lja4g0319 363 Pfam Glutaredoxin 213 283 IPR002109 -
Lja4g0319 363 PANTHER F1N19.7 1 362 - -
Lja4g0319 363 Coils Coil 176 196 - -
Lja4g0319 363 ProSiteProfiles Glutaredoxin domain profile. 201 310 - -
Lja4g0319 363 CDD GRX_GRX_like 212 359 - -
Lja4g0319 363 MobiDBLite consensus disorder prediction 89 110 - -
Lja4g0319 363 PANTHER GLUTAREDOXIN DOMAIN-CONTAINING CYSTEINE-RICH PROTEIN CG12206-RELATED 1 362 - -
Lja4g0319 363 SUPERFAMILY Thioredoxin-like 207 304 IPR036249 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja4g0319 Lja-Chr4 2576054 2577679 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja4g0319 K17479 - gmx:100809536 404.06
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja4g0319 4 2576054 2577679 Lja4g0319 4 2576054 2577679 ECH